Treenome Browser: co-visualization of enormous phylogenies and millions of genomes

SUMMARY: Treenome Browser is a web browser tool to interactively visualize millions of genomes alongside huge phylogenetic trees. AVAILABILITY AND IMPLEMENTATION: Treenome Browser for SARS-CoV-2 can be accessed at cov2tree.org, or at taxonium.org for user-provided trees. Source code and documentatio...

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Detalles Bibliográficos
Autores principales: Kramer, Alexander M, Sanderson, Theo, Corbett-Detig, Russell
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Applications Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9805588/
https://www.ncbi.nlm.nih.gov/pubmed/36453872
http://dx.doi.org/10.1093/bioinformatics/btac772
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author Kramer, Alexander M
Sanderson, Theo
Corbett-Detig, Russell
author_facet Kramer, Alexander M
Sanderson, Theo
Corbett-Detig, Russell
author_sort Kramer, Alexander M
collection PubMed
description SUMMARY: Treenome Browser is a web browser tool to interactively visualize millions of genomes alongside huge phylogenetic trees. AVAILABILITY AND IMPLEMENTATION: Treenome Browser for SARS-CoV-2 can be accessed at cov2tree.org, or at taxonium.org for user-provided trees. Source code and documentation are available at github.com/theosanderson/taxonium and docs.taxonium.org/en/latest/treenome.html. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.
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spelling pubmed-98055882023-01-03 Treenome Browser: co-visualization of enormous phylogenies and millions of genomes Kramer, Alexander M Sanderson, Theo Corbett-Detig, Russell Bioinformatics Applications Note SUMMARY: Treenome Browser is a web browser tool to interactively visualize millions of genomes alongside huge phylogenetic trees. AVAILABILITY AND IMPLEMENTATION: Treenome Browser for SARS-CoV-2 can be accessed at cov2tree.org, or at taxonium.org for user-provided trees. Source code and documentation are available at github.com/theosanderson/taxonium and docs.taxonium.org/en/latest/treenome.html. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online. Oxford University Press 2022-12-01 /pmc/articles/PMC9805588/ /pubmed/36453872 http://dx.doi.org/10.1093/bioinformatics/btac772 Text en © The Author(s) 2022. Published by Oxford University Press. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Applications Note
Kramer, Alexander M
Sanderson, Theo
Corbett-Detig, Russell
Treenome Browser: co-visualization of enormous phylogenies and millions of genomes
title Treenome Browser: co-visualization of enormous phylogenies and millions of genomes
title_full Treenome Browser: co-visualization of enormous phylogenies and millions of genomes
title_fullStr Treenome Browser: co-visualization of enormous phylogenies and millions of genomes
title_full_unstemmed Treenome Browser: co-visualization of enormous phylogenies and millions of genomes
title_short Treenome Browser: co-visualization of enormous phylogenies and millions of genomes
title_sort treenome browser: co-visualization of enormous phylogenies and millions of genomes
topic Applications Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9805588/
https://www.ncbi.nlm.nih.gov/pubmed/36453872
http://dx.doi.org/10.1093/bioinformatics/btac772
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