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A machine learning-based approach to predicting the malignant and metastasis of thyroid cancer
BACKGROUND: Thyroid Cancer (TC) is the most common malignant disease of endocrine system, and its incidence rate is increasing year by year. Early diagnosis, management of malignant nodules and scientific treatment are crucial for TC prognosis. The first aim is the construction of a classification m...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9806162/ https://www.ncbi.nlm.nih.gov/pubmed/36601485 http://dx.doi.org/10.3389/fonc.2022.938292 |
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author | Gu, Jianhua Xie, Rongli Zhao, Yanna Zhao, Zhifeng Xu, Dan Ding, Min Lin, Tingyu Xu, Wenjuan Nie, Zihuai Miao, Enjun Tan, Dan Zhu, Sibo Shen, Dongjie Fei, Jian |
author_facet | Gu, Jianhua Xie, Rongli Zhao, Yanna Zhao, Zhifeng Xu, Dan Ding, Min Lin, Tingyu Xu, Wenjuan Nie, Zihuai Miao, Enjun Tan, Dan Zhu, Sibo Shen, Dongjie Fei, Jian |
author_sort | Gu, Jianhua |
collection | PubMed |
description | BACKGROUND: Thyroid Cancer (TC) is the most common malignant disease of endocrine system, and its incidence rate is increasing year by year. Early diagnosis, management of malignant nodules and scientific treatment are crucial for TC prognosis. The first aim is the construction of a classification model for TC based on risk factors. The second aim is the construction of a prediction model for metastasis based on risk factors. METHODS: We retrospectively collected approximately 70 preoperative demographic and laboratory test indices from 1735 TC patients. Machine learning pipelines including linear regression model ridge, Logistic Regression (LR) and eXtreme Gradient Boosting (XGBoost) were used to select the best model for predicting deterioration and metastasis of TC. A comprehensive comparative analysis with the prediction model using only thyroid imaging reporting and data system (TI-RADS). RESULTS: The XGBoost model achieved the best performance in the final thyroid nodule diagnosis (AUC: 0.84) and metastasis (AUC: 0.72-0.77) predictions. Its AUCs for predicting Grade 4 TC deterioration and metastasis reached 0.84 and 0.97, respectively, while none of the AUCs for Only TI-RADS reached 0.70. Based on multivariate analysis and feature selection, age, obesity, prothrombin time, fibrinogen, and HBeAb were common significant risk factors for tumor progression and metastasis. Monocyte, D-dimer, T3, FT3, and albumin were common protective factors. Tumor size (11.14 ± 7.14 mm) is the most important indicator of metastasis formation. In addition, GGT, glucose, platelet volume distribution width, and neutrophil percentage also contributed to the development of metastases. The abnormal levels of blood lipid and uric acid were closely related to the deterioration of tumor. The dual role of mean erythrocytic hemoglobin concentration in TC needs to be verified in a larger patient cohort. We have established a free online tool (http://www.cancer-thyroid.com/) that is available to all clinicians for the prognosis of patients at high risk of TC. CONCLUSION: It is feasible to use XGBoost algorithm, combined with preoperative laboratory test indexes and demographic characteristics to predict tumor progression and metastasis in patients with TC, and its performance is better than that of Only using TI-RADS. The web tools we developed can help physicians with less clinical experience to choose the appropriate clinical decision or secondary confirmation of diagnosis results. |
format | Online Article Text |
id | pubmed-9806162 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-98061622023-01-03 A machine learning-based approach to predicting the malignant and metastasis of thyroid cancer Gu, Jianhua Xie, Rongli Zhao, Yanna Zhao, Zhifeng Xu, Dan Ding, Min Lin, Tingyu Xu, Wenjuan Nie, Zihuai Miao, Enjun Tan, Dan Zhu, Sibo Shen, Dongjie Fei, Jian Front Oncol Oncology BACKGROUND: Thyroid Cancer (TC) is the most common malignant disease of endocrine system, and its incidence rate is increasing year by year. Early diagnosis, management of malignant nodules and scientific treatment are crucial for TC prognosis. The first aim is the construction of a classification model for TC based on risk factors. The second aim is the construction of a prediction model for metastasis based on risk factors. METHODS: We retrospectively collected approximately 70 preoperative demographic and laboratory test indices from 1735 TC patients. Machine learning pipelines including linear regression model ridge, Logistic Regression (LR) and eXtreme Gradient Boosting (XGBoost) were used to select the best model for predicting deterioration and metastasis of TC. A comprehensive comparative analysis with the prediction model using only thyroid imaging reporting and data system (TI-RADS). RESULTS: The XGBoost model achieved the best performance in the final thyroid nodule diagnosis (AUC: 0.84) and metastasis (AUC: 0.72-0.77) predictions. Its AUCs for predicting Grade 4 TC deterioration and metastasis reached 0.84 and 0.97, respectively, while none of the AUCs for Only TI-RADS reached 0.70. Based on multivariate analysis and feature selection, age, obesity, prothrombin time, fibrinogen, and HBeAb were common significant risk factors for tumor progression and metastasis. Monocyte, D-dimer, T3, FT3, and albumin were common protective factors. Tumor size (11.14 ± 7.14 mm) is the most important indicator of metastasis formation. In addition, GGT, glucose, platelet volume distribution width, and neutrophil percentage also contributed to the development of metastases. The abnormal levels of blood lipid and uric acid were closely related to the deterioration of tumor. The dual role of mean erythrocytic hemoglobin concentration in TC needs to be verified in a larger patient cohort. We have established a free online tool (http://www.cancer-thyroid.com/) that is available to all clinicians for the prognosis of patients at high risk of TC. CONCLUSION: It is feasible to use XGBoost algorithm, combined with preoperative laboratory test indexes and demographic characteristics to predict tumor progression and metastasis in patients with TC, and its performance is better than that of Only using TI-RADS. The web tools we developed can help physicians with less clinical experience to choose the appropriate clinical decision or secondary confirmation of diagnosis results. Frontiers Media S.A. 2022-12-19 /pmc/articles/PMC9806162/ /pubmed/36601485 http://dx.doi.org/10.3389/fonc.2022.938292 Text en Copyright © 2022 Gu, Xie, Zhao, Zhao, Xu, Ding, Lin, Xu, Nie, Miao, Tan, Zhu, Shen and Fei https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Gu, Jianhua Xie, Rongli Zhao, Yanna Zhao, Zhifeng Xu, Dan Ding, Min Lin, Tingyu Xu, Wenjuan Nie, Zihuai Miao, Enjun Tan, Dan Zhu, Sibo Shen, Dongjie Fei, Jian A machine learning-based approach to predicting the malignant and metastasis of thyroid cancer |
title | A machine learning-based approach to predicting the malignant and metastasis of thyroid cancer |
title_full | A machine learning-based approach to predicting the malignant and metastasis of thyroid cancer |
title_fullStr | A machine learning-based approach to predicting the malignant and metastasis of thyroid cancer |
title_full_unstemmed | A machine learning-based approach to predicting the malignant and metastasis of thyroid cancer |
title_short | A machine learning-based approach to predicting the malignant and metastasis of thyroid cancer |
title_sort | machine learning-based approach to predicting the malignant and metastasis of thyroid cancer |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9806162/ https://www.ncbi.nlm.nih.gov/pubmed/36601485 http://dx.doi.org/10.3389/fonc.2022.938292 |
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