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RADIC:A tool for diagnosing COVID-19 from chest CT and X-ray scans using deep learning and quad-radiomics

Deep learning (DL) algorithms have demonstrated a high ability to perform speedy and accurate COVID-19 diagnosis utilizing computed tomography (CT) and X-Ray scans. The spatial information in these images was used to train DL models in the majority of relevant studies. However, training these models...

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Autor principal: Attallah, Omneya
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier B.V. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9807270/
https://www.ncbi.nlm.nih.gov/pubmed/36619376
http://dx.doi.org/10.1016/j.chemolab.2022.104750
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author Attallah, Omneya
author_facet Attallah, Omneya
author_sort Attallah, Omneya
collection PubMed
description Deep learning (DL) algorithms have demonstrated a high ability to perform speedy and accurate COVID-19 diagnosis utilizing computed tomography (CT) and X-Ray scans. The spatial information in these images was used to train DL models in the majority of relevant studies. However, training these models with images generated by radiomics approaches could enhance diagnostic accuracy. Furthermore, combining information from several radiomics approaches with time-frequency representations of the COVID-19 patterns can increase performance even further. This study introduces "RADIC", an automated tool that uses three DL models that are trained using radiomics-generated images to detect COVID-19. First, four radiomics approaches are used to analyze the original CT and X-ray images. Next, each of the three DL models is trained on a different set of radiomics, X-ray, and CT images. Then, for each DL model, deep features are obtained, and their dimensions are decreased using the Fast Walsh Hadamard Transform, yielding a time-frequency representation of the COVID-19 patterns. The tool then uses the discrete cosine transform to combine these deep features. Four classification models are then used to achieve classification. In order to validate the performance of RADIC, two benchmark datasets (CT and X-Ray) for COVID-19 are employed. The final accuracy attained using RADIC is 99.4% and 99% for the first and second datasets respectively. To prove the competing ability of RADIC, its performance is compared with related studies in the literature. The results reflect that RADIC achieve superior performance compared to other studies. The results of the proposed tool prove that a DL model can be trained more effectively with images generated by radiomics techniques than the original X-Ray and CT images. Besides, the incorporation of deep features extracted from DL models trained with multiple radiomics approaches will improve diagnostic accuracy.
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spelling pubmed-98072702023-01-04 RADIC:A tool for diagnosing COVID-19 from chest CT and X-ray scans using deep learning and quad-radiomics Attallah, Omneya Chemometr Intell Lab Syst Article Deep learning (DL) algorithms have demonstrated a high ability to perform speedy and accurate COVID-19 diagnosis utilizing computed tomography (CT) and X-Ray scans. The spatial information in these images was used to train DL models in the majority of relevant studies. However, training these models with images generated by radiomics approaches could enhance diagnostic accuracy. Furthermore, combining information from several radiomics approaches with time-frequency representations of the COVID-19 patterns can increase performance even further. This study introduces "RADIC", an automated tool that uses three DL models that are trained using radiomics-generated images to detect COVID-19. First, four radiomics approaches are used to analyze the original CT and X-ray images. Next, each of the three DL models is trained on a different set of radiomics, X-ray, and CT images. Then, for each DL model, deep features are obtained, and their dimensions are decreased using the Fast Walsh Hadamard Transform, yielding a time-frequency representation of the COVID-19 patterns. The tool then uses the discrete cosine transform to combine these deep features. Four classification models are then used to achieve classification. In order to validate the performance of RADIC, two benchmark datasets (CT and X-Ray) for COVID-19 are employed. The final accuracy attained using RADIC is 99.4% and 99% for the first and second datasets respectively. To prove the competing ability of RADIC, its performance is compared with related studies in the literature. The results reflect that RADIC achieve superior performance compared to other studies. The results of the proposed tool prove that a DL model can be trained more effectively with images generated by radiomics techniques than the original X-Ray and CT images. Besides, the incorporation of deep features extracted from DL models trained with multiple radiomics approaches will improve diagnostic accuracy. Elsevier B.V. 2023-02-15 2023-01-02 /pmc/articles/PMC9807270/ /pubmed/36619376 http://dx.doi.org/10.1016/j.chemolab.2022.104750 Text en © 2023 Elsevier B.V. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Attallah, Omneya
RADIC:A tool for diagnosing COVID-19 from chest CT and X-ray scans using deep learning and quad-radiomics
title RADIC:A tool for diagnosing COVID-19 from chest CT and X-ray scans using deep learning and quad-radiomics
title_full RADIC:A tool for diagnosing COVID-19 from chest CT and X-ray scans using deep learning and quad-radiomics
title_fullStr RADIC:A tool for diagnosing COVID-19 from chest CT and X-ray scans using deep learning and quad-radiomics
title_full_unstemmed RADIC:A tool for diagnosing COVID-19 from chest CT and X-ray scans using deep learning and quad-radiomics
title_short RADIC:A tool for diagnosing COVID-19 from chest CT and X-ray scans using deep learning and quad-radiomics
title_sort radic:a tool for diagnosing covid-19 from chest ct and x-ray scans using deep learning and quad-radiomics
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9807270/
https://www.ncbi.nlm.nih.gov/pubmed/36619376
http://dx.doi.org/10.1016/j.chemolab.2022.104750
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