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A computational study on the structure–function relationships of plant caleosins
Plant cells store energy in oil bodies constructed by structural proteins such as oleosins and caleosins. Although oil bodies usually accumulate in the seed and pollen of plants, caleosins are present in various organs and organelles. This issue, coupled with the diverse activities of caleosins, com...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9807586/ https://www.ncbi.nlm.nih.gov/pubmed/36593238 http://dx.doi.org/10.1038/s41598-022-26936-y |
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author | Saadat, Fatemeh |
author_facet | Saadat, Fatemeh |
author_sort | Saadat, Fatemeh |
collection | PubMed |
description | Plant cells store energy in oil bodies constructed by structural proteins such as oleosins and caleosins. Although oil bodies usually accumulate in the seed and pollen of plants, caleosins are present in various organs and organelles. This issue, coupled with the diverse activities of caleosins, complicates the description of these oleo-proteins. Therefore, the current article proposes a new classification based on the bioinformatics analysis of the transmembrane topology of caleosins. Accordingly, the non-membrane class are the most abundant and diverse caleosins, especially in lower plants. Comparing the results with other reports suggests a stress response capacity for these caleosins. However, other classes play a more specific role in germination and pollination. A phylogenetic study also revealed two main clades that were significantly different in terms of caleosin type, expression profile, molecular weight, and isoelectric point (P < 0.01). In addition to the biochemical significance of the findings, predicting the structure of caleosins is necessary for constructing oil bodies used in the food and pharmaceutical industries. |
format | Online Article Text |
id | pubmed-9807586 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-98075862023-01-04 A computational study on the structure–function relationships of plant caleosins Saadat, Fatemeh Sci Rep Article Plant cells store energy in oil bodies constructed by structural proteins such as oleosins and caleosins. Although oil bodies usually accumulate in the seed and pollen of plants, caleosins are present in various organs and organelles. This issue, coupled with the diverse activities of caleosins, complicates the description of these oleo-proteins. Therefore, the current article proposes a new classification based on the bioinformatics analysis of the transmembrane topology of caleosins. Accordingly, the non-membrane class are the most abundant and diverse caleosins, especially in lower plants. Comparing the results with other reports suggests a stress response capacity for these caleosins. However, other classes play a more specific role in germination and pollination. A phylogenetic study also revealed two main clades that were significantly different in terms of caleosin type, expression profile, molecular weight, and isoelectric point (P < 0.01). In addition to the biochemical significance of the findings, predicting the structure of caleosins is necessary for constructing oil bodies used in the food and pharmaceutical industries. Nature Publishing Group UK 2023-01-02 /pmc/articles/PMC9807586/ /pubmed/36593238 http://dx.doi.org/10.1038/s41598-022-26936-y Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Saadat, Fatemeh A computational study on the structure–function relationships of plant caleosins |
title | A computational study on the structure–function relationships of plant caleosins |
title_full | A computational study on the structure–function relationships of plant caleosins |
title_fullStr | A computational study on the structure–function relationships of plant caleosins |
title_full_unstemmed | A computational study on the structure–function relationships of plant caleosins |
title_short | A computational study on the structure–function relationships of plant caleosins |
title_sort | computational study on the structure–function relationships of plant caleosins |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9807586/ https://www.ncbi.nlm.nih.gov/pubmed/36593238 http://dx.doi.org/10.1038/s41598-022-26936-y |
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