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Identification and characterization of circular RNAs in the testicular tissue of patients with non-obstructive azoospermia

Circular RNAs (circRNAs) are highly conserved and ubiquitously expressed noncoding RNAs that participate in multiple reproduction-related diseases. However, the expression pattern and potential functions of circRNAs in the testes of patients with non-obstructive azoospermia (NOA) remain elusive. In...

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Autores principales: Zhang, Zhe, Wu, Han, Zheng, Lin, Zhang, Hai-Tao, Yang, Yu-Zhuo, Mao, Jia-Ming, Liu, De-Feng, Zhao, Lian-Ming, Liang, Hui, Jiang, Hui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Wolters Kluwer - Medknow 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9809480/
https://www.ncbi.nlm.nih.gov/pubmed/35229760
http://dx.doi.org/10.4103/aja2021131
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author Zhang, Zhe
Wu, Han
Zheng, Lin
Zhang, Hai-Tao
Yang, Yu-Zhuo
Mao, Jia-Ming
Liu, De-Feng
Zhao, Lian-Ming
Liang, Hui
Jiang, Hui
author_facet Zhang, Zhe
Wu, Han
Zheng, Lin
Zhang, Hai-Tao
Yang, Yu-Zhuo
Mao, Jia-Ming
Liu, De-Feng
Zhao, Lian-Ming
Liang, Hui
Jiang, Hui
author_sort Zhang, Zhe
collection PubMed
description Circular RNAs (circRNAs) are highly conserved and ubiquitously expressed noncoding RNAs that participate in multiple reproduction-related diseases. However, the expression pattern and potential functions of circRNAs in the testes of patients with non-obstructive azoospermia (NOA) remain elusive. In this study, according to a circRNA array, a total of 37 881 circRNAs were identified that were differentially expressed in the testes of NOA patients compared with normal controls, including 19 874 upregulated circRNAs and 18 007 downregulated circRNAs. Using quantitative real-time polymerase chain reaction (qRT-PCR) analysis, we confirmed that the change tendency of some specific circRNAs, including hsa_circ_0137890, hsa_circ_0136298, and hsa_circ_0007273, was consistent with the microarray data in another larger sample. The structures and characteristics of these circRNAs were confirmed by Sanger sequencing, and fluorescence in situ hybridization revealed that these circRNAs were primarily expressed in the cytoplasm. Bioinformatics analysis was used to construct the competing endogenous RNA (ceRNA) network, and numerous miRNAs that could be paired with circRNAs validated in this study were reported to be vital for spermatogenesis regulation. Gene Ontology and Kyoto Encyclopedia of Genes and Genomes pathway enrichment analyses indicated that genes involved in axoneme assembly, microtubule-based processes, and cell proliferation were significantly enriched. Our data suggest that there are aberrantly expressed circRNA profiles in patients with NOA and that these circRNAs may help identify key diagnostic and therapeutic molecular biomarkers for NOA patients.
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spelling pubmed-98094802023-01-04 Identification and characterization of circular RNAs in the testicular tissue of patients with non-obstructive azoospermia Zhang, Zhe Wu, Han Zheng, Lin Zhang, Hai-Tao Yang, Yu-Zhuo Mao, Jia-Ming Liu, De-Feng Zhao, Lian-Ming Liang, Hui Jiang, Hui Asian J Androl Original Article Circular RNAs (circRNAs) are highly conserved and ubiquitously expressed noncoding RNAs that participate in multiple reproduction-related diseases. However, the expression pattern and potential functions of circRNAs in the testes of patients with non-obstructive azoospermia (NOA) remain elusive. In this study, according to a circRNA array, a total of 37 881 circRNAs were identified that were differentially expressed in the testes of NOA patients compared with normal controls, including 19 874 upregulated circRNAs and 18 007 downregulated circRNAs. Using quantitative real-time polymerase chain reaction (qRT-PCR) analysis, we confirmed that the change tendency of some specific circRNAs, including hsa_circ_0137890, hsa_circ_0136298, and hsa_circ_0007273, was consistent with the microarray data in another larger sample. The structures and characteristics of these circRNAs were confirmed by Sanger sequencing, and fluorescence in situ hybridization revealed that these circRNAs were primarily expressed in the cytoplasm. Bioinformatics analysis was used to construct the competing endogenous RNA (ceRNA) network, and numerous miRNAs that could be paired with circRNAs validated in this study were reported to be vital for spermatogenesis regulation. Gene Ontology and Kyoto Encyclopedia of Genes and Genomes pathway enrichment analyses indicated that genes involved in axoneme assembly, microtubule-based processes, and cell proliferation were significantly enriched. Our data suggest that there are aberrantly expressed circRNA profiles in patients with NOA and that these circRNAs may help identify key diagnostic and therapeutic molecular biomarkers for NOA patients. Wolters Kluwer - Medknow 2022-02-18 /pmc/articles/PMC9809480/ /pubmed/35229760 http://dx.doi.org/10.4103/aja2021131 Text en Copyright: ©The Author(s)(2022) https://creativecommons.org/licenses/by-nc-sa/4.0/This is an open access journal, and articles are distributed under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike 4.0 License, which allows others to remix, tweak, and build upon the work non-commercially, as long as appropriate credit is given and the new creations are licensed under the identical terms.
spellingShingle Original Article
Zhang, Zhe
Wu, Han
Zheng, Lin
Zhang, Hai-Tao
Yang, Yu-Zhuo
Mao, Jia-Ming
Liu, De-Feng
Zhao, Lian-Ming
Liang, Hui
Jiang, Hui
Identification and characterization of circular RNAs in the testicular tissue of patients with non-obstructive azoospermia
title Identification and characterization of circular RNAs in the testicular tissue of patients with non-obstructive azoospermia
title_full Identification and characterization of circular RNAs in the testicular tissue of patients with non-obstructive azoospermia
title_fullStr Identification and characterization of circular RNAs in the testicular tissue of patients with non-obstructive azoospermia
title_full_unstemmed Identification and characterization of circular RNAs in the testicular tissue of patients with non-obstructive azoospermia
title_short Identification and characterization of circular RNAs in the testicular tissue of patients with non-obstructive azoospermia
title_sort identification and characterization of circular rnas in the testicular tissue of patients with non-obstructive azoospermia
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9809480/
https://www.ncbi.nlm.nih.gov/pubmed/35229760
http://dx.doi.org/10.4103/aja2021131
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