Cargando…

Identification of Asymptomatic COVID-19 Patients on Chest CT Images Using Transformer-Based or Convolutional Neural Network–Based Deep Learning Models

Novel coronavirus disease 2019 (COVID-19) has rapidly spread throughout the world; however, it is difficult for clinicians to make early diagnoses. This study is to evaluate the feasibility of using deep learning (DL) models to identify asymptomatic COVID-19 patients based on chest CT images. In thi...

Descripción completa

Detalles Bibliográficos
Autores principales: Yin, Minyue, Liang, Xiaolong, Wang, Zilan, Zhou, Yijia, He, Yu, Xue, Yuhan, Gao, Jingwen, Lin, Jiaxi, Yu, Chenyan, Liu, Lu, Liu, Xiaolin, Xu, Chao, Zhu, Jinzhou
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9810383/
https://www.ncbi.nlm.nih.gov/pubmed/36596937
http://dx.doi.org/10.1007/s10278-022-00754-0
_version_ 1784863298923003904
author Yin, Minyue
Liang, Xiaolong
Wang, Zilan
Zhou, Yijia
He, Yu
Xue, Yuhan
Gao, Jingwen
Lin, Jiaxi
Yu, Chenyan
Liu, Lu
Liu, Xiaolin
Xu, Chao
Zhu, Jinzhou
author_facet Yin, Minyue
Liang, Xiaolong
Wang, Zilan
Zhou, Yijia
He, Yu
Xue, Yuhan
Gao, Jingwen
Lin, Jiaxi
Yu, Chenyan
Liu, Lu
Liu, Xiaolin
Xu, Chao
Zhu, Jinzhou
author_sort Yin, Minyue
collection PubMed
description Novel coronavirus disease 2019 (COVID-19) has rapidly spread throughout the world; however, it is difficult for clinicians to make early diagnoses. This study is to evaluate the feasibility of using deep learning (DL) models to identify asymptomatic COVID-19 patients based on chest CT images. In this retrospective study, six DL models (Xception, NASNet, ResNet, EfficientNet, ViT, and Swin), based on convolutional neural networks (CNNs) or transformer architectures, were trained to identify asymptomatic patients with COVID-19 on chest CT images. Data from Yangzhou were randomly split into a training set (n = 2140) and an internal-validation set (n = 360). Data from Suzhou was the external-test set (n = 200). Model performance was assessed by the metrics accuracy, recall, and specificity and was compared with the assessments of two radiologists. A total of 2700 chest CT images were collected in this study. In the validation dataset, the Swin model achieved the highest accuracy of 0.994, followed by the EfficientNet model (0.954). The recall and the precision of the Swin model were 0.989 and 1.000, respectively. In the test dataset, the Swin model was still the best and achieved the highest accuracy (0.980). All the DL models performed remarkably better than the two experts. Last, the time on the test set diagnosis spent by two experts—42 min, 17 s (junior); and 29 min, 43 s (senior)—was significantly higher than those of the DL models (all below 2 min). This study evaluated the feasibility of multiple DL models in distinguishing asymptomatic patients with COVID-19 from healthy subjects on chest CT images. It found that a transformer-based model, the Swin model, performed best.
format Online
Article
Text
id pubmed-9810383
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Springer International Publishing
record_format MEDLINE/PubMed
spelling pubmed-98103832023-01-04 Identification of Asymptomatic COVID-19 Patients on Chest CT Images Using Transformer-Based or Convolutional Neural Network–Based Deep Learning Models Yin, Minyue Liang, Xiaolong Wang, Zilan Zhou, Yijia He, Yu Xue, Yuhan Gao, Jingwen Lin, Jiaxi Yu, Chenyan Liu, Lu Liu, Xiaolin Xu, Chao Zhu, Jinzhou J Digit Imaging Original Paper Novel coronavirus disease 2019 (COVID-19) has rapidly spread throughout the world; however, it is difficult for clinicians to make early diagnoses. This study is to evaluate the feasibility of using deep learning (DL) models to identify asymptomatic COVID-19 patients based on chest CT images. In this retrospective study, six DL models (Xception, NASNet, ResNet, EfficientNet, ViT, and Swin), based on convolutional neural networks (CNNs) or transformer architectures, were trained to identify asymptomatic patients with COVID-19 on chest CT images. Data from Yangzhou were randomly split into a training set (n = 2140) and an internal-validation set (n = 360). Data from Suzhou was the external-test set (n = 200). Model performance was assessed by the metrics accuracy, recall, and specificity and was compared with the assessments of two radiologists. A total of 2700 chest CT images were collected in this study. In the validation dataset, the Swin model achieved the highest accuracy of 0.994, followed by the EfficientNet model (0.954). The recall and the precision of the Swin model were 0.989 and 1.000, respectively. In the test dataset, the Swin model was still the best and achieved the highest accuracy (0.980). All the DL models performed remarkably better than the two experts. Last, the time on the test set diagnosis spent by two experts—42 min, 17 s (junior); and 29 min, 43 s (senior)—was significantly higher than those of the DL models (all below 2 min). This study evaluated the feasibility of multiple DL models in distinguishing asymptomatic patients with COVID-19 from healthy subjects on chest CT images. It found that a transformer-based model, the Swin model, performed best. Springer International Publishing 2023-01-03 2023-06 /pmc/articles/PMC9810383/ /pubmed/36596937 http://dx.doi.org/10.1007/s10278-022-00754-0 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Original Paper
Yin, Minyue
Liang, Xiaolong
Wang, Zilan
Zhou, Yijia
He, Yu
Xue, Yuhan
Gao, Jingwen
Lin, Jiaxi
Yu, Chenyan
Liu, Lu
Liu, Xiaolin
Xu, Chao
Zhu, Jinzhou
Identification of Asymptomatic COVID-19 Patients on Chest CT Images Using Transformer-Based or Convolutional Neural Network–Based Deep Learning Models
title Identification of Asymptomatic COVID-19 Patients on Chest CT Images Using Transformer-Based or Convolutional Neural Network–Based Deep Learning Models
title_full Identification of Asymptomatic COVID-19 Patients on Chest CT Images Using Transformer-Based or Convolutional Neural Network–Based Deep Learning Models
title_fullStr Identification of Asymptomatic COVID-19 Patients on Chest CT Images Using Transformer-Based or Convolutional Neural Network–Based Deep Learning Models
title_full_unstemmed Identification of Asymptomatic COVID-19 Patients on Chest CT Images Using Transformer-Based or Convolutional Neural Network–Based Deep Learning Models
title_short Identification of Asymptomatic COVID-19 Patients on Chest CT Images Using Transformer-Based or Convolutional Neural Network–Based Deep Learning Models
title_sort identification of asymptomatic covid-19 patients on chest ct images using transformer-based or convolutional neural network–based deep learning models
topic Original Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9810383/
https://www.ncbi.nlm.nih.gov/pubmed/36596937
http://dx.doi.org/10.1007/s10278-022-00754-0
work_keys_str_mv AT yinminyue identificationofasymptomaticcovid19patientsonchestctimagesusingtransformerbasedorconvolutionalneuralnetworkbaseddeeplearningmodels
AT liangxiaolong identificationofasymptomaticcovid19patientsonchestctimagesusingtransformerbasedorconvolutionalneuralnetworkbaseddeeplearningmodels
AT wangzilan identificationofasymptomaticcovid19patientsonchestctimagesusingtransformerbasedorconvolutionalneuralnetworkbaseddeeplearningmodels
AT zhouyijia identificationofasymptomaticcovid19patientsonchestctimagesusingtransformerbasedorconvolutionalneuralnetworkbaseddeeplearningmodels
AT heyu identificationofasymptomaticcovid19patientsonchestctimagesusingtransformerbasedorconvolutionalneuralnetworkbaseddeeplearningmodels
AT xueyuhan identificationofasymptomaticcovid19patientsonchestctimagesusingtransformerbasedorconvolutionalneuralnetworkbaseddeeplearningmodels
AT gaojingwen identificationofasymptomaticcovid19patientsonchestctimagesusingtransformerbasedorconvolutionalneuralnetworkbaseddeeplearningmodels
AT linjiaxi identificationofasymptomaticcovid19patientsonchestctimagesusingtransformerbasedorconvolutionalneuralnetworkbaseddeeplearningmodels
AT yuchenyan identificationofasymptomaticcovid19patientsonchestctimagesusingtransformerbasedorconvolutionalneuralnetworkbaseddeeplearningmodels
AT liulu identificationofasymptomaticcovid19patientsonchestctimagesusingtransformerbasedorconvolutionalneuralnetworkbaseddeeplearningmodels
AT liuxiaolin identificationofasymptomaticcovid19patientsonchestctimagesusingtransformerbasedorconvolutionalneuralnetworkbaseddeeplearningmodels
AT xuchao identificationofasymptomaticcovid19patientsonchestctimagesusingtransformerbasedorconvolutionalneuralnetworkbaseddeeplearningmodels
AT zhujinzhou identificationofasymptomaticcovid19patientsonchestctimagesusingtransformerbasedorconvolutionalneuralnetworkbaseddeeplearningmodels