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rxCOV is a quantitative metric for assessing immunoassay analyte fidelity
Immunoassay based bioanalytical measurements are widely used in a variety of biomedical research and clinical settings. In these settings they are assumed to faithfully represent the experimental conditions being tested and the sample groups being compared. Although significant technical advances ha...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9810650/ https://www.ncbi.nlm.nih.gov/pubmed/36596931 http://dx.doi.org/10.1038/s41598-022-27309-1 |
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author | Brand, Rhonda M. Pitlor, Danielle Metter, E. Jeffrey Dudley, Beth Karloski, Eve Zyhowski, Ashley Brand, Randall E. Uttam, Shikhar |
author_facet | Brand, Rhonda M. Pitlor, Danielle Metter, E. Jeffrey Dudley, Beth Karloski, Eve Zyhowski, Ashley Brand, Randall E. Uttam, Shikhar |
author_sort | Brand, Rhonda M. |
collection | PubMed |
description | Immunoassay based bioanalytical measurements are widely used in a variety of biomedical research and clinical settings. In these settings they are assumed to faithfully represent the experimental conditions being tested and the sample groups being compared. Although significant technical advances have been made in improving sensitivity and quality of the measurements, currently no metrics exist that objectively quantify the fidelity of the measured analytes with respect to noise associated with the specific assay. Here we introduce ratio of cross-coefficient-of-variation (rxCOV), a fidelity metric for objectively assessing immunoassay analyte measurement quality when comparing its differential expression between different sample groups or experimental conditions. We derive the metric from first principles and establish its feasibility and applicability using simulated and experimental data. We show that rxCOV assesses fidelity independent of statistical significance, and importantly, identifies when latter is meaningful. We also discuss its importance in the context of averaging experimental replicates for increasing signal to noise ratio. Finally, we demonstrate its application in a Lynch Syndrome case study. We conclude by discussing its applicability to multiplexed immunoassays, other biosensing assays, and to paired and unpaired data. We anticipate rxCOV to be adopted as a simple and easy-to-use fidelity metric for performing robust and reproducible biomedical research. |
format | Online Article Text |
id | pubmed-9810650 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-98106502023-01-05 rxCOV is a quantitative metric for assessing immunoassay analyte fidelity Brand, Rhonda M. Pitlor, Danielle Metter, E. Jeffrey Dudley, Beth Karloski, Eve Zyhowski, Ashley Brand, Randall E. Uttam, Shikhar Sci Rep Article Immunoassay based bioanalytical measurements are widely used in a variety of biomedical research and clinical settings. In these settings they are assumed to faithfully represent the experimental conditions being tested and the sample groups being compared. Although significant technical advances have been made in improving sensitivity and quality of the measurements, currently no metrics exist that objectively quantify the fidelity of the measured analytes with respect to noise associated with the specific assay. Here we introduce ratio of cross-coefficient-of-variation (rxCOV), a fidelity metric for objectively assessing immunoassay analyte measurement quality when comparing its differential expression between different sample groups or experimental conditions. We derive the metric from first principles and establish its feasibility and applicability using simulated and experimental data. We show that rxCOV assesses fidelity independent of statistical significance, and importantly, identifies when latter is meaningful. We also discuss its importance in the context of averaging experimental replicates for increasing signal to noise ratio. Finally, we demonstrate its application in a Lynch Syndrome case study. We conclude by discussing its applicability to multiplexed immunoassays, other biosensing assays, and to paired and unpaired data. We anticipate rxCOV to be adopted as a simple and easy-to-use fidelity metric for performing robust and reproducible biomedical research. Nature Publishing Group UK 2023-01-03 /pmc/articles/PMC9810650/ /pubmed/36596931 http://dx.doi.org/10.1038/s41598-022-27309-1 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Brand, Rhonda M. Pitlor, Danielle Metter, E. Jeffrey Dudley, Beth Karloski, Eve Zyhowski, Ashley Brand, Randall E. Uttam, Shikhar rxCOV is a quantitative metric for assessing immunoassay analyte fidelity |
title | rxCOV is a quantitative metric for assessing immunoassay analyte fidelity |
title_full | rxCOV is a quantitative metric for assessing immunoassay analyte fidelity |
title_fullStr | rxCOV is a quantitative metric for assessing immunoassay analyte fidelity |
title_full_unstemmed | rxCOV is a quantitative metric for assessing immunoassay analyte fidelity |
title_short | rxCOV is a quantitative metric for assessing immunoassay analyte fidelity |
title_sort | rxcov is a quantitative metric for assessing immunoassay analyte fidelity |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9810650/ https://www.ncbi.nlm.nih.gov/pubmed/36596931 http://dx.doi.org/10.1038/s41598-022-27309-1 |
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