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Comprehensive identification of bHLH transcription factors in Litsea cubeba reveals candidate gene involved in the monoterpene biosynthesis pathway

Litsea cubeba (Lour.) Person, an economically important aromatic plant producing essential oils, has lemon-like fragrance and 96.44–98.44% monoterpene contents. bHLH transcription factor plays an important role in plant secondary metabolism and terpene biosynthesis. In this study, we used bioinforma...

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Autores principales: Yang, Jiahui, Chen, Yicun, Gao, Ming, Wu, Liwen, Xiong, Shifa, Wang, Siqi, Gao, Jing, Zhao, Yunxiao, Wang, Yangdong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9811127/
https://www.ncbi.nlm.nih.gov/pubmed/36618662
http://dx.doi.org/10.3389/fpls.2022.1081335
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author Yang, Jiahui
Chen, Yicun
Gao, Ming
Wu, Liwen
Xiong, Shifa
Wang, Siqi
Gao, Jing
Zhao, Yunxiao
Wang, Yangdong
author_facet Yang, Jiahui
Chen, Yicun
Gao, Ming
Wu, Liwen
Xiong, Shifa
Wang, Siqi
Gao, Jing
Zhao, Yunxiao
Wang, Yangdong
author_sort Yang, Jiahui
collection PubMed
description Litsea cubeba (Lour.) Person, an economically important aromatic plant producing essential oils, has lemon-like fragrance and 96.44–98.44% monoterpene contents. bHLH transcription factor plays an important role in plant secondary metabolism and terpene biosynthesis. In this study, we used bioinformatics to identify bHLH transcription factors in L. cubeba, 173 bHLH genes were identified from L. cubeba and divided these into 26 subfamilies based on phylogenetic analysis. The majority of bHLHs in each subfamily shared comparable structures and motifs. While LcbHLHs were unevenly distributed across 12 chromosomes, 10 tandem repeats were discovered. Expression profiles of bHLH genes in different tissues demonstrated that LcbHLH78 is a potential candidate gene for regulating monoterpene biosynthesis. LcbHLH78 and the terpene synthase LcTPS42 showed comparable expression patterns in various tissues and fruit development stages of L. cubeba. Subcellular localization analysis revealed that LcbHLH78 protein localizes to the nucleus, consistent with a transcription factor function. Importantly, transient overexpression of LcbHLH78 increased geraniol and linalol contents. Our research demonstrates that LcbHLH78 enhances terpenoid biosynthesis. This finding will be beneficial for improving the quality of L. cubeba and provides helpful insights for further research into the control mechanism of LcbHLH genes over terpenoid biosynthesis.
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spelling pubmed-98111272023-01-05 Comprehensive identification of bHLH transcription factors in Litsea cubeba reveals candidate gene involved in the monoterpene biosynthesis pathway Yang, Jiahui Chen, Yicun Gao, Ming Wu, Liwen Xiong, Shifa Wang, Siqi Gao, Jing Zhao, Yunxiao Wang, Yangdong Front Plant Sci Plant Science Litsea cubeba (Lour.) Person, an economically important aromatic plant producing essential oils, has lemon-like fragrance and 96.44–98.44% monoterpene contents. bHLH transcription factor plays an important role in plant secondary metabolism and terpene biosynthesis. In this study, we used bioinformatics to identify bHLH transcription factors in L. cubeba, 173 bHLH genes were identified from L. cubeba and divided these into 26 subfamilies based on phylogenetic analysis. The majority of bHLHs in each subfamily shared comparable structures and motifs. While LcbHLHs were unevenly distributed across 12 chromosomes, 10 tandem repeats were discovered. Expression profiles of bHLH genes in different tissues demonstrated that LcbHLH78 is a potential candidate gene for regulating monoterpene biosynthesis. LcbHLH78 and the terpene synthase LcTPS42 showed comparable expression patterns in various tissues and fruit development stages of L. cubeba. Subcellular localization analysis revealed that LcbHLH78 protein localizes to the nucleus, consistent with a transcription factor function. Importantly, transient overexpression of LcbHLH78 increased geraniol and linalol contents. Our research demonstrates that LcbHLH78 enhances terpenoid biosynthesis. This finding will be beneficial for improving the quality of L. cubeba and provides helpful insights for further research into the control mechanism of LcbHLH genes over terpenoid biosynthesis. Frontiers Media S.A. 2022-12-21 /pmc/articles/PMC9811127/ /pubmed/36618662 http://dx.doi.org/10.3389/fpls.2022.1081335 Text en Copyright © 2022 Yang, Chen, Gao, Wu, Xiong, Wang, Gao, Zhao and Wang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Yang, Jiahui
Chen, Yicun
Gao, Ming
Wu, Liwen
Xiong, Shifa
Wang, Siqi
Gao, Jing
Zhao, Yunxiao
Wang, Yangdong
Comprehensive identification of bHLH transcription factors in Litsea cubeba reveals candidate gene involved in the monoterpene biosynthesis pathway
title Comprehensive identification of bHLH transcription factors in Litsea cubeba reveals candidate gene involved in the monoterpene biosynthesis pathway
title_full Comprehensive identification of bHLH transcription factors in Litsea cubeba reveals candidate gene involved in the monoterpene biosynthesis pathway
title_fullStr Comprehensive identification of bHLH transcription factors in Litsea cubeba reveals candidate gene involved in the monoterpene biosynthesis pathway
title_full_unstemmed Comprehensive identification of bHLH transcription factors in Litsea cubeba reveals candidate gene involved in the monoterpene biosynthesis pathway
title_short Comprehensive identification of bHLH transcription factors in Litsea cubeba reveals candidate gene involved in the monoterpene biosynthesis pathway
title_sort comprehensive identification of bhlh transcription factors in litsea cubeba reveals candidate gene involved in the monoterpene biosynthesis pathway
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9811127/
https://www.ncbi.nlm.nih.gov/pubmed/36618662
http://dx.doi.org/10.3389/fpls.2022.1081335
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