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Populus root exudates are associated with rhizosphere microbial communities and symbiotic patterns

INTRODUCTION: Microbial communities in the plant rhizosphere are critical for nutrient cycling and ecosystem stability. However, how root exudates and soil physicochemical characteristics affect microbial community composition in Populus rhizosphere is not well understood. METHODS: This study measur...

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Autores principales: Li, Mengjie, Song, Zhen, Li, Zhanbiao, Qiao, Rongye, Zhang, Pingdong, Ding, Changjun, Xie, Jianbo, Chen, Yinglong, Guo, Hui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9812961/
https://www.ncbi.nlm.nih.gov/pubmed/36619999
http://dx.doi.org/10.3389/fmicb.2022.1042944
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author Li, Mengjie
Song, Zhen
Li, Zhanbiao
Qiao, Rongye
Zhang, Pingdong
Ding, Changjun
Xie, Jianbo
Chen, Yinglong
Guo, Hui
author_facet Li, Mengjie
Song, Zhen
Li, Zhanbiao
Qiao, Rongye
Zhang, Pingdong
Ding, Changjun
Xie, Jianbo
Chen, Yinglong
Guo, Hui
author_sort Li, Mengjie
collection PubMed
description INTRODUCTION: Microbial communities in the plant rhizosphere are critical for nutrient cycling and ecosystem stability. However, how root exudates and soil physicochemical characteristics affect microbial community composition in Populus rhizosphere is not well understood. METHODS: This study measured soil physiochemistry properties and root exudates in a representative forest consists of four Populus species. The composition of rhizosphere bacterial and fungal communities was determined by metabolomics and high-throughput sequencing. RESULTS: Luvangetin, salicylic acid, gentisic acid, oleuropein, strigol, chrysin, and linoleic acid were the differential root exudates extracted in the rhizosphere of four Populus species, which explained 48.40, 82.80, 48.73, and 59.64% of the variance for the dominant and key bacterial or fungal communities, respectively. Data showed that differential root exudates were the main drivers of the changes in the rhizosphere microbial communities. Nitrosospira, Microvirga, Trichoderma, Cortinarius, and Beauveria were the keystone taxa in the rhizosphere microbial communities, and are thus important for maintaining a stable Populus microbial rhizosphere. The differential root exudates had strong impact on key bacteria than dominant bacteria, key fungi, and dominant fungi. Moreover, strigol had positively effects with bacteria, whereas phenolic compounds and chrysin were negatively correlated with rhizosphere microorganisms. The assembly process of the community structure (keystone taxa and bacterial dominant taxa) was mostly determined by stochastic processes. DISCUSSION: This study showed the association of rhizosphere microorganisms (dominant and keystone taxa) with differential root exudates in the rhizosphere of Populus plants, and revealed the assembly process of the dominant and keystone taxa. It provides a theoretical basis for the identification and utilization of beneficial microorganisms in Populus rhizosphere.
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spelling pubmed-98129612023-01-06 Populus root exudates are associated with rhizosphere microbial communities and symbiotic patterns Li, Mengjie Song, Zhen Li, Zhanbiao Qiao, Rongye Zhang, Pingdong Ding, Changjun Xie, Jianbo Chen, Yinglong Guo, Hui Front Microbiol Microbiology INTRODUCTION: Microbial communities in the plant rhizosphere are critical for nutrient cycling and ecosystem stability. However, how root exudates and soil physicochemical characteristics affect microbial community composition in Populus rhizosphere is not well understood. METHODS: This study measured soil physiochemistry properties and root exudates in a representative forest consists of four Populus species. The composition of rhizosphere bacterial and fungal communities was determined by metabolomics and high-throughput sequencing. RESULTS: Luvangetin, salicylic acid, gentisic acid, oleuropein, strigol, chrysin, and linoleic acid were the differential root exudates extracted in the rhizosphere of four Populus species, which explained 48.40, 82.80, 48.73, and 59.64% of the variance for the dominant and key bacterial or fungal communities, respectively. Data showed that differential root exudates were the main drivers of the changes in the rhizosphere microbial communities. Nitrosospira, Microvirga, Trichoderma, Cortinarius, and Beauveria were the keystone taxa in the rhizosphere microbial communities, and are thus important for maintaining a stable Populus microbial rhizosphere. The differential root exudates had strong impact on key bacteria than dominant bacteria, key fungi, and dominant fungi. Moreover, strigol had positively effects with bacteria, whereas phenolic compounds and chrysin were negatively correlated with rhizosphere microorganisms. The assembly process of the community structure (keystone taxa and bacterial dominant taxa) was mostly determined by stochastic processes. DISCUSSION: This study showed the association of rhizosphere microorganisms (dominant and keystone taxa) with differential root exudates in the rhizosphere of Populus plants, and revealed the assembly process of the dominant and keystone taxa. It provides a theoretical basis for the identification and utilization of beneficial microorganisms in Populus rhizosphere. Frontiers Media S.A. 2022-12-22 /pmc/articles/PMC9812961/ /pubmed/36619999 http://dx.doi.org/10.3389/fmicb.2022.1042944 Text en Copyright © 2022 Li, Song, Li, Qiao, Zhang, Ding, Xie, Chen, and Guo. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Li, Mengjie
Song, Zhen
Li, Zhanbiao
Qiao, Rongye
Zhang, Pingdong
Ding, Changjun
Xie, Jianbo
Chen, Yinglong
Guo, Hui
Populus root exudates are associated with rhizosphere microbial communities and symbiotic patterns
title Populus root exudates are associated with rhizosphere microbial communities and symbiotic patterns
title_full Populus root exudates are associated with rhizosphere microbial communities and symbiotic patterns
title_fullStr Populus root exudates are associated with rhizosphere microbial communities and symbiotic patterns
title_full_unstemmed Populus root exudates are associated with rhizosphere microbial communities and symbiotic patterns
title_short Populus root exudates are associated with rhizosphere microbial communities and symbiotic patterns
title_sort populus root exudates are associated with rhizosphere microbial communities and symbiotic patterns
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9812961/
https://www.ncbi.nlm.nih.gov/pubmed/36619999
http://dx.doi.org/10.3389/fmicb.2022.1042944
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