Cargando…
Inconsistent hydrogen bond-mediated vibrational coupling of amide I
Using infrared spectroscopy and density functional theory (DFT) calculations, we scrutinized an amide (dimethylformamide) as a “model” compound to interpret the interactions of amide 1 with different phenol derivatives (para-chlorophenol (PCP) and para-cresol (CP)) as “model guest molecules”. We est...
Autores principales: | , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society of Chemistry
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9814034/ https://www.ncbi.nlm.nih.gov/pubmed/36686902 http://dx.doi.org/10.1039/d2ra07177k |
_version_ | 1784864045635993600 |
---|---|
author | Chakrabarty, Suranjana Ghosh, Anup |
author_facet | Chakrabarty, Suranjana Ghosh, Anup |
author_sort | Chakrabarty, Suranjana |
collection | PubMed |
description | Using infrared spectroscopy and density functional theory (DFT) calculations, we scrutinized an amide (dimethylformamide) as a “model” compound to interpret the interactions of amide 1 with different phenol derivatives (para-chlorophenol (PCP) and para-cresol (CP)) as “model guest molecules”. We established the involvement of amide I in vibrational coupling with symmetric and asymmetric C[double bond, length as m-dash]C modes of different phenolic derivatives and how their coupling was dependent upon different guest aromatic phenolic compounds. Interestingly, substitution of phenol perturbed the pattern of vibrational coupling with amide I. The symmetric and asymmetric C[double bond, length as m-dash]C modes of PC were coupled significantly with amide 1. For PCP, the symmetric C[double bond, length as m-dash]C mode coupled significantly, but the asymmetric mode coupled negligibly, with amide I. Here, we reveal the nature of vibrational coupling based on the structure of a guest molecule hydrogen-bonded with amide I. Our conclusions could be valuable for depiction of the unusual dynamics of coupled amide-I modes as well as the dependency of vibrational coupling on altered factors. |
format | Online Article Text |
id | pubmed-9814034 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | The Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-98140342023-01-20 Inconsistent hydrogen bond-mediated vibrational coupling of amide I Chakrabarty, Suranjana Ghosh, Anup RSC Adv Chemistry Using infrared spectroscopy and density functional theory (DFT) calculations, we scrutinized an amide (dimethylformamide) as a “model” compound to interpret the interactions of amide 1 with different phenol derivatives (para-chlorophenol (PCP) and para-cresol (CP)) as “model guest molecules”. We established the involvement of amide I in vibrational coupling with symmetric and asymmetric C[double bond, length as m-dash]C modes of different phenolic derivatives and how their coupling was dependent upon different guest aromatic phenolic compounds. Interestingly, substitution of phenol perturbed the pattern of vibrational coupling with amide I. The symmetric and asymmetric C[double bond, length as m-dash]C modes of PC were coupled significantly with amide 1. For PCP, the symmetric C[double bond, length as m-dash]C mode coupled significantly, but the asymmetric mode coupled negligibly, with amide I. Here, we reveal the nature of vibrational coupling based on the structure of a guest molecule hydrogen-bonded with amide I. Our conclusions could be valuable for depiction of the unusual dynamics of coupled amide-I modes as well as the dependency of vibrational coupling on altered factors. The Royal Society of Chemistry 2023-01-05 /pmc/articles/PMC9814034/ /pubmed/36686902 http://dx.doi.org/10.1039/d2ra07177k Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/ |
spellingShingle | Chemistry Chakrabarty, Suranjana Ghosh, Anup Inconsistent hydrogen bond-mediated vibrational coupling of amide I |
title | Inconsistent hydrogen bond-mediated vibrational coupling of amide I |
title_full | Inconsistent hydrogen bond-mediated vibrational coupling of amide I |
title_fullStr | Inconsistent hydrogen bond-mediated vibrational coupling of amide I |
title_full_unstemmed | Inconsistent hydrogen bond-mediated vibrational coupling of amide I |
title_short | Inconsistent hydrogen bond-mediated vibrational coupling of amide I |
title_sort | inconsistent hydrogen bond-mediated vibrational coupling of amide i |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9814034/ https://www.ncbi.nlm.nih.gov/pubmed/36686902 http://dx.doi.org/10.1039/d2ra07177k |
work_keys_str_mv | AT chakrabartysuranjana inconsistenthydrogenbondmediatedvibrationalcouplingofamidei AT ghoshanup inconsistenthydrogenbondmediatedvibrationalcouplingofamidei |