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Jungfraujoch: hardware-accelerated data-acquisition system for kilohertz pixel-array X-ray detectors

The JUNGFRAU 4-megapixel (4M) charge-integrating pixel-array detector, when operated at a full 2 kHz frame rate, streams data at a rate of 17 GB s(−1). To operate this detector for macromolecular crystallography beamlines, a data-acquisition system called Jungfraujoch was developed. The system, runn...

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Autores principales: Leonarski, Filip, Brückner, Martin, Lopez-Cuenca, Carlos, Mozzanica, Aldo, Stadler, Hans-Christian, Matěj, Zdeněk, Castellane, Alexandre, Mesnet, Bruno, Wojdyla, Justyna Aleksandra, Schmitt, Bernd, Wang, Meitian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9814052/
https://www.ncbi.nlm.nih.gov/pubmed/36601941
http://dx.doi.org/10.1107/S1600577522010268
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author Leonarski, Filip
Brückner, Martin
Lopez-Cuenca, Carlos
Mozzanica, Aldo
Stadler, Hans-Christian
Matěj, Zdeněk
Castellane, Alexandre
Mesnet, Bruno
Wojdyla, Justyna Aleksandra
Schmitt, Bernd
Wang, Meitian
author_facet Leonarski, Filip
Brückner, Martin
Lopez-Cuenca, Carlos
Mozzanica, Aldo
Stadler, Hans-Christian
Matěj, Zdeněk
Castellane, Alexandre
Mesnet, Bruno
Wojdyla, Justyna Aleksandra
Schmitt, Bernd
Wang, Meitian
author_sort Leonarski, Filip
collection PubMed
description The JUNGFRAU 4-megapixel (4M) charge-integrating pixel-array detector, when operated at a full 2 kHz frame rate, streams data at a rate of 17 GB s(−1). To operate this detector for macromolecular crystallography beamlines, a data-acquisition system called Jungfraujoch was developed. The system, running on a single server with field-programmable gate arrays and general-purpose graphics processing units, is capable of handling data produced by the JUNGFRAU 4M detector, including conversion of raw pixel readout to photon counts, compression and on-the-fly spot finding. It was also demonstrated that 30 GB s(−1) can be handled in performance tests, indicating that the operation of even larger and faster detectors will be achievable in the future. The source code is available from a public repository.
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spelling pubmed-98140522023-01-09 Jungfraujoch: hardware-accelerated data-acquisition system for kilohertz pixel-array X-ray detectors Leonarski, Filip Brückner, Martin Lopez-Cuenca, Carlos Mozzanica, Aldo Stadler, Hans-Christian Matěj, Zdeněk Castellane, Alexandre Mesnet, Bruno Wojdyla, Justyna Aleksandra Schmitt, Bernd Wang, Meitian J Synchrotron Radiat Short Communications The JUNGFRAU 4-megapixel (4M) charge-integrating pixel-array detector, when operated at a full 2 kHz frame rate, streams data at a rate of 17 GB s(−1). To operate this detector for macromolecular crystallography beamlines, a data-acquisition system called Jungfraujoch was developed. The system, running on a single server with field-programmable gate arrays and general-purpose graphics processing units, is capable of handling data produced by the JUNGFRAU 4M detector, including conversion of raw pixel readout to photon counts, compression and on-the-fly spot finding. It was also demonstrated that 30 GB s(−1) can be handled in performance tests, indicating that the operation of even larger and faster detectors will be achievable in the future. The source code is available from a public repository. International Union of Crystallography 2023-01-01 /pmc/articles/PMC9814052/ /pubmed/36601941 http://dx.doi.org/10.1107/S1600577522010268 Text en © Filip Leonarski et al. 2023 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Short Communications
Leonarski, Filip
Brückner, Martin
Lopez-Cuenca, Carlos
Mozzanica, Aldo
Stadler, Hans-Christian
Matěj, Zdeněk
Castellane, Alexandre
Mesnet, Bruno
Wojdyla, Justyna Aleksandra
Schmitt, Bernd
Wang, Meitian
Jungfraujoch: hardware-accelerated data-acquisition system for kilohertz pixel-array X-ray detectors
title Jungfraujoch: hardware-accelerated data-acquisition system for kilohertz pixel-array X-ray detectors
title_full Jungfraujoch: hardware-accelerated data-acquisition system for kilohertz pixel-array X-ray detectors
title_fullStr Jungfraujoch: hardware-accelerated data-acquisition system for kilohertz pixel-array X-ray detectors
title_full_unstemmed Jungfraujoch: hardware-accelerated data-acquisition system for kilohertz pixel-array X-ray detectors
title_short Jungfraujoch: hardware-accelerated data-acquisition system for kilohertz pixel-array X-ray detectors
title_sort jungfraujoch: hardware-accelerated data-acquisition system for kilohertz pixel-array x-ray detectors
topic Short Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9814052/
https://www.ncbi.nlm.nih.gov/pubmed/36601941
http://dx.doi.org/10.1107/S1600577522010268
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