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Differential phase contrast for quantitative imaging and spectro-microscopy at a nanoprobe beamline

The interaction of a focused X-ray beam with a sample in a scanning probe experiment can provide a variety of information about the interaction volume. In many scanning probe experiments X-ray fluorescence (XRF) is supplemented with measurements of the transmitted or scattered intensity using a pixe...

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Autores principales: Quinn, Paul D., Cacho-Nerin, Fernando, Gomez-Gonzalez, Miguel A., Parker, Julia E., Poon, Timothy, Walker, Jessica M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9814065/
https://www.ncbi.nlm.nih.gov/pubmed/36601938
http://dx.doi.org/10.1107/S1600577522010633
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author Quinn, Paul D.
Cacho-Nerin, Fernando
Gomez-Gonzalez, Miguel A.
Parker, Julia E.
Poon, Timothy
Walker, Jessica M.
author_facet Quinn, Paul D.
Cacho-Nerin, Fernando
Gomez-Gonzalez, Miguel A.
Parker, Julia E.
Poon, Timothy
Walker, Jessica M.
author_sort Quinn, Paul D.
collection PubMed
description The interaction of a focused X-ray beam with a sample in a scanning probe experiment can provide a variety of information about the interaction volume. In many scanning probe experiments X-ray fluorescence (XRF) is supplemented with measurements of the transmitted or scattered intensity using a pixelated detector. The automated extraction of different signals from an area pixelated detector is described, in particular the methodology for extracting differential phase contrast (DPC) is demonstrated and different processing methods are compared across a range of samples. The phase shift of the transmitted X-ray beam by the sample, extracted from DPC, is also compared with ptychography measurements to provide a qualitative and quantitative comparison. While ptychography produces a superior image, DPC can offer a simple, flexible method for phase contrast imaging which can provide fast results and feedback during an experiment; furthermore, for many science problems, such as registration of XRF in a lighter matrix, DPC can provide sufficient information to meet the experimental aims. As the DPC technique is a quantitative measurement, it can be expanded to spectroscopic studies and a demonstration of DPC for spectro-microscopy measurements is presented. Where ptychography can separate the absorption and phase shifts by the sample, quantitative interpretation of a DPC image or spectro-microscopy signal can only be performed directly when absorption is negligible or where the absorption contribution is known and the contributions can be fitted.
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spelling pubmed-98140652023-01-09 Differential phase contrast for quantitative imaging and spectro-microscopy at a nanoprobe beamline Quinn, Paul D. Cacho-Nerin, Fernando Gomez-Gonzalez, Miguel A. Parker, Julia E. Poon, Timothy Walker, Jessica M. J Synchrotron Radiat Research Papers The interaction of a focused X-ray beam with a sample in a scanning probe experiment can provide a variety of information about the interaction volume. In many scanning probe experiments X-ray fluorescence (XRF) is supplemented with measurements of the transmitted or scattered intensity using a pixelated detector. The automated extraction of different signals from an area pixelated detector is described, in particular the methodology for extracting differential phase contrast (DPC) is demonstrated and different processing methods are compared across a range of samples. The phase shift of the transmitted X-ray beam by the sample, extracted from DPC, is also compared with ptychography measurements to provide a qualitative and quantitative comparison. While ptychography produces a superior image, DPC can offer a simple, flexible method for phase contrast imaging which can provide fast results and feedback during an experiment; furthermore, for many science problems, such as registration of XRF in a lighter matrix, DPC can provide sufficient information to meet the experimental aims. As the DPC technique is a quantitative measurement, it can be expanded to spectroscopic studies and a demonstration of DPC for spectro-microscopy measurements is presented. Where ptychography can separate the absorption and phase shifts by the sample, quantitative interpretation of a DPC image or spectro-microscopy signal can only be performed directly when absorption is negligible or where the absorption contribution is known and the contributions can be fitted. International Union of Crystallography 2023-01-01 /pmc/articles/PMC9814065/ /pubmed/36601938 http://dx.doi.org/10.1107/S1600577522010633 Text en © Paul D. Quinn et al. 2023 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Research Papers
Quinn, Paul D.
Cacho-Nerin, Fernando
Gomez-Gonzalez, Miguel A.
Parker, Julia E.
Poon, Timothy
Walker, Jessica M.
Differential phase contrast for quantitative imaging and spectro-microscopy at a nanoprobe beamline
title Differential phase contrast for quantitative imaging and spectro-microscopy at a nanoprobe beamline
title_full Differential phase contrast for quantitative imaging and spectro-microscopy at a nanoprobe beamline
title_fullStr Differential phase contrast for quantitative imaging and spectro-microscopy at a nanoprobe beamline
title_full_unstemmed Differential phase contrast for quantitative imaging and spectro-microscopy at a nanoprobe beamline
title_short Differential phase contrast for quantitative imaging and spectro-microscopy at a nanoprobe beamline
title_sort differential phase contrast for quantitative imaging and spectro-microscopy at a nanoprobe beamline
topic Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9814065/
https://www.ncbi.nlm.nih.gov/pubmed/36601938
http://dx.doi.org/10.1107/S1600577522010633
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