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Machine learning for laser-induced electron diffraction imaging of molecular structures
Ultrafast diffraction imaging is a powerful tool to retrieve the geometric structure of gas-phase molecules with combined picometre spatial and attosecond temporal resolution. However, structural retrieval becomes progressively difficult with increasing structural complexity, given that a global ext...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9814146/ https://www.ncbi.nlm.nih.gov/pubmed/36697668 http://dx.doi.org/10.1038/s42004-021-00594-z |
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author | Liu, Xinyao Amini, Kasra Sanchez, Aurelien Belsa, Blanca Steinle, Tobias Biegert, Jens |
author_facet | Liu, Xinyao Amini, Kasra Sanchez, Aurelien Belsa, Blanca Steinle, Tobias Biegert, Jens |
author_sort | Liu, Xinyao |
collection | PubMed |
description | Ultrafast diffraction imaging is a powerful tool to retrieve the geometric structure of gas-phase molecules with combined picometre spatial and attosecond temporal resolution. However, structural retrieval becomes progressively difficult with increasing structural complexity, given that a global extremum must be found in a multi-dimensional solution space. Worse, pre-calculating many thousands of molecular configurations for all orientations becomes simply intractable. As a remedy, here, we propose a machine learning algorithm with a convolutional neural network which can be trained with a limited set of molecular configurations. We demonstrate structural retrieval of a complex and large molecule, Fenchone (C(10)H(16)O), from laser-induced electron diffraction (LIED) data without fitting algorithms or ab initio calculations. Retrieval of such a large molecular structure is not possible with other variants of LIED or ultrafast electron diffraction. Combining electron diffraction with machine learning presents new opportunities to image complex and larger molecules in static and time-resolved studies. |
format | Online Article Text |
id | pubmed-9814146 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-98141462023-01-10 Machine learning for laser-induced electron diffraction imaging of molecular structures Liu, Xinyao Amini, Kasra Sanchez, Aurelien Belsa, Blanca Steinle, Tobias Biegert, Jens Commun Chem Article Ultrafast diffraction imaging is a powerful tool to retrieve the geometric structure of gas-phase molecules with combined picometre spatial and attosecond temporal resolution. However, structural retrieval becomes progressively difficult with increasing structural complexity, given that a global extremum must be found in a multi-dimensional solution space. Worse, pre-calculating many thousands of molecular configurations for all orientations becomes simply intractable. As a remedy, here, we propose a machine learning algorithm with a convolutional neural network which can be trained with a limited set of molecular configurations. We demonstrate structural retrieval of a complex and large molecule, Fenchone (C(10)H(16)O), from laser-induced electron diffraction (LIED) data without fitting algorithms or ab initio calculations. Retrieval of such a large molecular structure is not possible with other variants of LIED or ultrafast electron diffraction. Combining electron diffraction with machine learning presents new opportunities to image complex and larger molecules in static and time-resolved studies. Nature Publishing Group UK 2021-11-09 /pmc/articles/PMC9814146/ /pubmed/36697668 http://dx.doi.org/10.1038/s42004-021-00594-z Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Liu, Xinyao Amini, Kasra Sanchez, Aurelien Belsa, Blanca Steinle, Tobias Biegert, Jens Machine learning for laser-induced electron diffraction imaging of molecular structures |
title | Machine learning for laser-induced electron diffraction imaging of molecular structures |
title_full | Machine learning for laser-induced electron diffraction imaging of molecular structures |
title_fullStr | Machine learning for laser-induced electron diffraction imaging of molecular structures |
title_full_unstemmed | Machine learning for laser-induced electron diffraction imaging of molecular structures |
title_short | Machine learning for laser-induced electron diffraction imaging of molecular structures |
title_sort | machine learning for laser-induced electron diffraction imaging of molecular structures |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9814146/ https://www.ncbi.nlm.nih.gov/pubmed/36697668 http://dx.doi.org/10.1038/s42004-021-00594-z |
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