Cargando…
A semi-automated material exploration scheme to predict the solubilities of tetraphenylporphyrin derivatives
Acceleration of material discovery has been tackled by informatics and laboratory automation. Here we show a semi-automated material exploration scheme to modelize the solubility of tetraphenylporphyrin derivatives. The scheme involved the following steps: definition of a practical chemical search s...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9814751/ https://www.ncbi.nlm.nih.gov/pubmed/36697881 http://dx.doi.org/10.1038/s42004-022-00770-9 |
_version_ | 1784864206189756416 |
---|---|
author | Shirasawa, Raku Takemura, Ichiro Hattori, Shinnosuke Nagata, Yuuya |
author_facet | Shirasawa, Raku Takemura, Ichiro Hattori, Shinnosuke Nagata, Yuuya |
author_sort | Shirasawa, Raku |
collection | PubMed |
description | Acceleration of material discovery has been tackled by informatics and laboratory automation. Here we show a semi-automated material exploration scheme to modelize the solubility of tetraphenylporphyrin derivatives. The scheme involved the following steps: definition of a practical chemical search space, prioritization of molecules in the space using an extended algorithm for submodular function maximization without requiring biased variable selection or pre-existing data, synthesis & automated measurement, and machine-learning model estimation. The optimal evaluation order selected using the algorithm covered several similar molecules (32% of all targeted molecules, whereas that obtained by random sampling and uncertainty sampling was ~7% and ~4%, respectively) with a small number of evaluations (10 molecules: 0.13% of all targeted molecules). The derived binary classification models predicted ‘good solvents’ with an accuracy >0.8. Overall, we confirmed the effectivity of the proposed semi-automated scheme in early-stage material search projects for accelerating a wider range of material research. |
format | Online Article Text |
id | pubmed-9814751 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-98147512023-01-10 A semi-automated material exploration scheme to predict the solubilities of tetraphenylporphyrin derivatives Shirasawa, Raku Takemura, Ichiro Hattori, Shinnosuke Nagata, Yuuya Commun Chem Article Acceleration of material discovery has been tackled by informatics and laboratory automation. Here we show a semi-automated material exploration scheme to modelize the solubility of tetraphenylporphyrin derivatives. The scheme involved the following steps: definition of a practical chemical search space, prioritization of molecules in the space using an extended algorithm for submodular function maximization without requiring biased variable selection or pre-existing data, synthesis & automated measurement, and machine-learning model estimation. The optimal evaluation order selected using the algorithm covered several similar molecules (32% of all targeted molecules, whereas that obtained by random sampling and uncertainty sampling was ~7% and ~4%, respectively) with a small number of evaluations (10 molecules: 0.13% of all targeted molecules). The derived binary classification models predicted ‘good solvents’ with an accuracy >0.8. Overall, we confirmed the effectivity of the proposed semi-automated scheme in early-stage material search projects for accelerating a wider range of material research. Nature Publishing Group UK 2022-11-22 /pmc/articles/PMC9814751/ /pubmed/36697881 http://dx.doi.org/10.1038/s42004-022-00770-9 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Shirasawa, Raku Takemura, Ichiro Hattori, Shinnosuke Nagata, Yuuya A semi-automated material exploration scheme to predict the solubilities of tetraphenylporphyrin derivatives |
title | A semi-automated material exploration scheme to predict the solubilities of tetraphenylporphyrin derivatives |
title_full | A semi-automated material exploration scheme to predict the solubilities of tetraphenylporphyrin derivatives |
title_fullStr | A semi-automated material exploration scheme to predict the solubilities of tetraphenylporphyrin derivatives |
title_full_unstemmed | A semi-automated material exploration scheme to predict the solubilities of tetraphenylporphyrin derivatives |
title_short | A semi-automated material exploration scheme to predict the solubilities of tetraphenylporphyrin derivatives |
title_sort | semi-automated material exploration scheme to predict the solubilities of tetraphenylporphyrin derivatives |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9814751/ https://www.ncbi.nlm.nih.gov/pubmed/36697881 http://dx.doi.org/10.1038/s42004-022-00770-9 |
work_keys_str_mv | AT shirasawaraku asemiautomatedmaterialexplorationschemetopredictthesolubilitiesoftetraphenylporphyrinderivatives AT takemuraichiro asemiautomatedmaterialexplorationschemetopredictthesolubilitiesoftetraphenylporphyrinderivatives AT hattorishinnosuke asemiautomatedmaterialexplorationschemetopredictthesolubilitiesoftetraphenylporphyrinderivatives AT nagatayuuya asemiautomatedmaterialexplorationschemetopredictthesolubilitiesoftetraphenylporphyrinderivatives AT shirasawaraku semiautomatedmaterialexplorationschemetopredictthesolubilitiesoftetraphenylporphyrinderivatives AT takemuraichiro semiautomatedmaterialexplorationschemetopredictthesolubilitiesoftetraphenylporphyrinderivatives AT hattorishinnosuke semiautomatedmaterialexplorationschemetopredictthesolubilitiesoftetraphenylporphyrinderivatives AT nagatayuuya semiautomatedmaterialexplorationschemetopredictthesolubilitiesoftetraphenylporphyrinderivatives |