Cargando…

Inference of dynamic interaction networks: A comparison between Lotka-Volterra and multivariate autoregressive models

Networks are ubiquitous throughout biology, spanning the entire range from molecules to food webs and global environmental systems. Yet, despite substantial efforts by the scientific community, the inference of these networks from data still presents a problem that is unsolved in general. One freque...

Descripción completa

Detalles Bibliográficos
Autores principales:	Olivença, Daniel V., Davis, Jacob D., Voit, Eberhard O.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Frontiers Media S.A. 2022
Materias:	Bioinformatics
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9815445/ https://www.ncbi.nlm.nih.gov/pubmed/36619477 http://dx.doi.org/10.3389/fbinf.2022.1021838

Ejemplares similares

Compositional Lotka-Volterra describes microbial dynamics in the simplex
por: Joseph, Tyler A., et al.
Publicado: (2020)

Transcendental Lie symmetries and the Lotka-Volterra system
por: Almeida, M A, et al.
Publicado: (1994)

An introduction to mathematical population dynamics: along the trail of Volterra and Lotka
por: Iannelli, Mimmo, et al.
Publicado: (2014)

The correspondence between chemical schemes and dynamical Lotka-Volterra systems
por: Dubovik, V M, et al.
Publicado: (1997)

The Lotka-Volterra model as a Hamiltonian system
por: Cronström, C, et al.
Publicado: (1993)

Conditions for Eltonian Pyramids in Lotka-Volterra Food Chains
por: Jonsson, Tomas
Publicado: (2017)

Lotka–Volterra approximations for evolutionary trait-substitution processes
por: Ito, Hiroshi C., et al.
Publicado: (2020)

Data-Driven Corrections of Partial Lotka–Volterra Models
por: Morrison, Rebecca E.
Publicado: (2020)

Lotka–Volterra models for extraterrestrial self-replicating probes
por: Chen, Yifan, et al.
Publicado: (2022)

Food Web Assembly Rules for Generalized Lotka-Volterra Equations
por: Haerter, Jan O., et al.
Publicado: (2016)

An analytical study of the dynamic behavior of Lotka-Volterra based models of COVID-19
por: Mohammed, Wael W., et al.
Publicado: (2021)

Lotka-Volterra pairwise modeling fails to capture diverse pairwise microbial interactions
por: Momeni, Babak, et al.
Publicado: (2017)

Structural identifiability of the generalized Lotka–Volterra model for microbiome studies
por: Remien, Christopher H., et al.
Publicado: (2021)

The Impact of Microplastic Particles on Population Dynamics of Predator and Prey: Implication of the Lotka-Volterra Model
por: Huang, Qi, et al.
Publicado: (2020)

Darboux method and search of invariants for the Lotka-Volterra and complex quadratic systems
por: Cairo, L, et al.
Publicado: (1998)

Asymptotic stability of a modified Lotka-Volterra model with small immigrations
por: Tahara, Takeru, et al.
Publicado: (2018)

Multi-species coexistence in Lotka-Volterra competitive systems with crowding effects
por: Gavina, Maica Krizna A., et al.
Publicado: (2018)

Population overcompensation, transients, and oscillations in age-structured Lotka-Volterra models
por: Xia, Mingtao, et al.
Publicado: (2023)

Fractional Lotka-Volterra-Type Cooperation Models: Impulsive Control on Their Stability Behavior
por: Tuladhar, Rohisha, et al.
Publicado: (2020)

Memory and mutualism in species sustainability: A time-fractional Lotka-Volterra model with harvesting
por: Amirian, Mohammad M., et al.
Publicado: (2020)

Higher order solitary solutions to the meta-model of diffusively coupled Lotka–Volterra systems
por: Timofejeva, Inga, et al.
Publicado: (2021)

A Study of Tourism Dynamics in Three Italian Regions Using a Nonautonomous Integrable Lotka–Volterra Model
por: Romano, Alessandro
Publicado: (2016)

Modeling Competitive Mixtures With the Lotka-Volterra Framework for More Complex Fitness Assessment Between Strains
por: Dimas Martins, Afonso, et al.
Publicado: (2020)

gauseR: Simple methods for fitting Lotka‐Volterra models describing Gause’s “Struggle for Existence”
por: Mühlbauer, Lina K., et al.
Publicado: (2020)

Visual synchronization of two 3-variable Lotka–Volterra oscillators based on DNA strand displacement
por: Zou, Chengye, et al.
Publicado: (2018)

Bistability in a system of two species interacting through mutualism as well as competition: Chemostat vs. Lotka-Volterra equations
por: Vet, Stefan, et al.
Publicado: (2018)

When does a Lotka-Volterra model represent microbial interactions? Insights from in vitro nasal bacterial communities
por: Dedrick, Sandra, et al.
Publicado: (2023)

Smart Buildings IoT Networks Accuracy Evolution Prediction to Improve Their Reliability Using a Lotka–Volterra Ecosystem Model
por: Casado-Vara, Roberto, et al.
Publicado: (2019)

The conditions of existence of first integrals and Hamiltonian structures of the Lotka-Volterra equations: comment on some of the recent papers
por: Dubovik, V M, et al.
Publicado: (1997)

Analyzing the ecological relations of technology innovation of the Chinese high-tech industry based on the Lotka-Volterra model
por: Xia, Ming, et al.
Publicado: (2022)

Lotka–Volterra dynamics kills the Red Queen: population size fluctuations and associated stochasticity dramatically change host-parasite coevolution
por: Gokhale, Chaitanya S, et al.
Publicado: (2013)

Determining firms׳ utility functions and competitive roles from data on market shares using Lotka–Volterra models
por: Marasco, A., et al.
Publicado: (2016)

Web-gLV: A Web Based Platform for Lotka-Volterra Based Modeling and Simulation of Microbial Populations
por: Kuntal, Bhusan K., et al.
Publicado: (2019)

Research on the Evaluation and Spatial Characteristics of China’s Provincial Socioeconomic Development and Pollution Control Based on the Lotka–Volterra Model
por: Zhou, Xue, et al.
Publicado: (2023)

Corrigendum: Web-gLV: A Web Based Platform for Lotka-Volterra Based Modeling and Simulation of Microbial Populations
por: Kuntal, Bhusan K., et al.
Publicado: (2021)

Application of Grey Lotka-Volterra Model in Water-Economy-Industry-Technology Innovation System in Beijing-Tianjin-Hebei Region
por: Guo, Xiaorui, et al.
Publicado: (2022)

Evaluation of industrial ecology in the π-shaped curve area of China’s Yellow River based on the grey Lotka–Volterra model
por: Sun, Yifang
Publicado: (2023)

How do Google searches for symptoms, news and unemployment interact during COVID-19? A Lotka–Volterra analysis of google trends data
por: Sotis, Chiara
Publicado: (2021)

Editorial: Inference of Biological Networks
por: Akutsu, Tatsuya, et al.
Publicado: (2022)

Optimizing support vector machines and autoregressive integrated moving average methods for heart rate variability data correction
por: Svane, Jakob, et al.
Publicado: (2023)

Cannot write session to /tmp/vufind_sessions/sess_thm0d6ngamt0vvcetuncdpoe5q