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TDF(CAM): A method for estimating stable isotope trophic discrimination in wild populations

1. Stable isotope mixing models (SIMMs) are widely used for characterizing wild animal diets. Such models rely upon using accurate trophic discrimination factors (TDFs) to account for the digestion, incorporation, and assimilation of food. Existing methods to calculate TDFs rely on controlled feedin...

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Autores principales: Johnson, Devin L., Henderson, Michael T., Franke, Alastair, Swan, George J. F., McDonald, Robbie A., Anderson, David L., Booms, Travis L., Williams, Cory T.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9817186/
https://www.ncbi.nlm.nih.gov/pubmed/36620422
http://dx.doi.org/10.1002/ece3.9709
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author Johnson, Devin L.
Henderson, Michael T.
Franke, Alastair
Swan, George J. F.
McDonald, Robbie A.
Anderson, David L.
Booms, Travis L.
Williams, Cory T.
author_facet Johnson, Devin L.
Henderson, Michael T.
Franke, Alastair
Swan, George J. F.
McDonald, Robbie A.
Anderson, David L.
Booms, Travis L.
Williams, Cory T.
author_sort Johnson, Devin L.
collection PubMed
description 1. Stable isotope mixing models (SIMMs) are widely used for characterizing wild animal diets. Such models rely upon using accurate trophic discrimination factors (TDFs) to account for the digestion, incorporation, and assimilation of food. Existing methods to calculate TDFs rely on controlled feeding trials that are time‐consuming, often impractical for the study taxon, and may not reflect natural variability of TDFs present in wild populations. 2. We present TDF(CAM) as an alternative approach to estimating TDFs in wild populations, by using high‐precision diet estimates from a secondary methodological source—in this case nest cameras—in lieu of controlled feeding trials, and provide a framework for how and when it should be applied. 3. In this study, we evaluate the TDF(CAM) approach in three datasets gathered on wild raptor nestlings (gyrfalcons Falco rusticolus; peregrine falcons Falco perigrinus; common buzzards Buteo buteo) comprising contemporaneous δ(13)C & δ(15)N stable isotope data and high‐quality nest camera dietary data. We formulate Bayesian SIMMs (BSIMMs) incorporating TDFs from TDF(CAM) and analyze their agreement with nest camera data, comparing model performance with those based on other relevant TDFs. Additionally, we perform sensitivity analyses to characterize TDF(CAM) variability, and identify ecological and physiological factors contributing to that variability in wild populations. 4. Across species and tissue types, BSIMMs incorporating a TDF(CAM) outperformed any other TDF tested, producing reliable population‐level estimates of diet composition. We demonstrate that applying this approach even with a relatively low sample size (n < 10 individuals) produced more accurate estimates of trophic discrimination than a controlled feeding study conducted on the same species. Between‐individual variability in TDF(CAM) estimates for ∆(13)C & ∆(15) N increased with analytical imprecision in the source dietary data (nest cameras) but was also explained by natural variables in the study population (e.g., nestling nutritional/growth status and dietary composition). 5. TDF(CAM) is an effective method of estimating trophic discrimination in wild animal populations. Here, we use nest cameras as source dietary data, but this approach is applicable to any high‐accuracy method of measuring diet, so long as diet can be monitored over an interval contemporaneous with a tissue's isotopic turnover rate.
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spelling pubmed-98171862023-01-06 TDF(CAM): A method for estimating stable isotope trophic discrimination in wild populations Johnson, Devin L. Henderson, Michael T. Franke, Alastair Swan, George J. F. McDonald, Robbie A. Anderson, David L. Booms, Travis L. Williams, Cory T. Ecol Evol Research Articles 1. Stable isotope mixing models (SIMMs) are widely used for characterizing wild animal diets. Such models rely upon using accurate trophic discrimination factors (TDFs) to account for the digestion, incorporation, and assimilation of food. Existing methods to calculate TDFs rely on controlled feeding trials that are time‐consuming, often impractical for the study taxon, and may not reflect natural variability of TDFs present in wild populations. 2. We present TDF(CAM) as an alternative approach to estimating TDFs in wild populations, by using high‐precision diet estimates from a secondary methodological source—in this case nest cameras—in lieu of controlled feeding trials, and provide a framework for how and when it should be applied. 3. In this study, we evaluate the TDF(CAM) approach in three datasets gathered on wild raptor nestlings (gyrfalcons Falco rusticolus; peregrine falcons Falco perigrinus; common buzzards Buteo buteo) comprising contemporaneous δ(13)C & δ(15)N stable isotope data and high‐quality nest camera dietary data. We formulate Bayesian SIMMs (BSIMMs) incorporating TDFs from TDF(CAM) and analyze their agreement with nest camera data, comparing model performance with those based on other relevant TDFs. Additionally, we perform sensitivity analyses to characterize TDF(CAM) variability, and identify ecological and physiological factors contributing to that variability in wild populations. 4. Across species and tissue types, BSIMMs incorporating a TDF(CAM) outperformed any other TDF tested, producing reliable population‐level estimates of diet composition. We demonstrate that applying this approach even with a relatively low sample size (n < 10 individuals) produced more accurate estimates of trophic discrimination than a controlled feeding study conducted on the same species. Between‐individual variability in TDF(CAM) estimates for ∆(13)C & ∆(15) N increased with analytical imprecision in the source dietary data (nest cameras) but was also explained by natural variables in the study population (e.g., nestling nutritional/growth status and dietary composition). 5. TDF(CAM) is an effective method of estimating trophic discrimination in wild animal populations. Here, we use nest cameras as source dietary data, but this approach is applicable to any high‐accuracy method of measuring diet, so long as diet can be monitored over an interval contemporaneous with a tissue's isotopic turnover rate. John Wiley and Sons Inc. 2023-01-06 /pmc/articles/PMC9817186/ /pubmed/36620422 http://dx.doi.org/10.1002/ece3.9709 Text en © 2023 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Johnson, Devin L.
Henderson, Michael T.
Franke, Alastair
Swan, George J. F.
McDonald, Robbie A.
Anderson, David L.
Booms, Travis L.
Williams, Cory T.
TDF(CAM): A method for estimating stable isotope trophic discrimination in wild populations
title TDF(CAM): A method for estimating stable isotope trophic discrimination in wild populations
title_full TDF(CAM): A method for estimating stable isotope trophic discrimination in wild populations
title_fullStr TDF(CAM): A method for estimating stable isotope trophic discrimination in wild populations
title_full_unstemmed TDF(CAM): A method for estimating stable isotope trophic discrimination in wild populations
title_short TDF(CAM): A method for estimating stable isotope trophic discrimination in wild populations
title_sort tdf(cam): a method for estimating stable isotope trophic discrimination in wild populations
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9817186/
https://www.ncbi.nlm.nih.gov/pubmed/36620422
http://dx.doi.org/10.1002/ece3.9709
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