Cargando…

TLRs Gene Polymorphisms Associated with Pneumonia before and during COVID-19 Pandemic

Background: The progression of infectious diseases depends on the characteristics of a patient’s innate immunity, and the efficiency of an immune system depends on the patient’s genetic factors, including SNPs in the TLR genes. In this pilot study, we determined the frequency of alleles in these SNP...

Descripción completa

Detalles Bibliográficos
Autores principales: Salamaikina, Svetlana, Karnaushkina, Maria, Korchagin, Vitaly, Litvinova, Maria, Mironov, Konstantin, Akimkin, Vasily
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9818199/
https://www.ncbi.nlm.nih.gov/pubmed/36611413
http://dx.doi.org/10.3390/diagnostics13010121
_version_ 1784864926589779968
author Salamaikina, Svetlana
Karnaushkina, Maria
Korchagin, Vitaly
Litvinova, Maria
Mironov, Konstantin
Akimkin, Vasily
author_facet Salamaikina, Svetlana
Karnaushkina, Maria
Korchagin, Vitaly
Litvinova, Maria
Mironov, Konstantin
Akimkin, Vasily
author_sort Salamaikina, Svetlana
collection PubMed
description Background: The progression of infectious diseases depends on the characteristics of a patient’s innate immunity, and the efficiency of an immune system depends on the patient’s genetic factors, including SNPs in the TLR genes. In this pilot study, we determined the frequency of alleles in these SNPs in a subset of patients with pneumonia. Methods: This study assessed six SNPs from TLR genes: rs5743551 (TLR1), rs5743708, rs3804100 (TLR2), rs4986790 (TLR4), rs5743810 (TLR6), and rs3764880 (TLR8). Three groups of patients participated in this study: patients with pneumonia in 2019 (76 samples), patients with pneumonia caused by SARS-CoV-2 in 2021 (85 samples), and the control group (99 samples). Results: The allele and genotype frequencies obtained for each group were examined using four genetic models. Significant results were obtained when comparing the samples obtained from individuals with pneumonia before the spread of SARS-CoV-2 and from the controls for rs5743551 (TLR1) and rs3764880 (TLR8). Additionally, the comparison of COVID-19-related pneumonia cases and the control group revealed a significant result for rs3804100-G (TLR2). Conclusions: Determining SNP allele frequencies and searching for their associations with the course of pneumonia are important for personalized patient management. However, our results need to be comprehensively assessed in consideration of other clinical parameters.
format Online
Article
Text
id pubmed-9818199
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-98181992023-01-07 TLRs Gene Polymorphisms Associated with Pneumonia before and during COVID-19 Pandemic Salamaikina, Svetlana Karnaushkina, Maria Korchagin, Vitaly Litvinova, Maria Mironov, Konstantin Akimkin, Vasily Diagnostics (Basel) Article Background: The progression of infectious diseases depends on the characteristics of a patient’s innate immunity, and the efficiency of an immune system depends on the patient’s genetic factors, including SNPs in the TLR genes. In this pilot study, we determined the frequency of alleles in these SNPs in a subset of patients with pneumonia. Methods: This study assessed six SNPs from TLR genes: rs5743551 (TLR1), rs5743708, rs3804100 (TLR2), rs4986790 (TLR4), rs5743810 (TLR6), and rs3764880 (TLR8). Three groups of patients participated in this study: patients with pneumonia in 2019 (76 samples), patients with pneumonia caused by SARS-CoV-2 in 2021 (85 samples), and the control group (99 samples). Results: The allele and genotype frequencies obtained for each group were examined using four genetic models. Significant results were obtained when comparing the samples obtained from individuals with pneumonia before the spread of SARS-CoV-2 and from the controls for rs5743551 (TLR1) and rs3764880 (TLR8). Additionally, the comparison of COVID-19-related pneumonia cases and the control group revealed a significant result for rs3804100-G (TLR2). Conclusions: Determining SNP allele frequencies and searching for their associations with the course of pneumonia are important for personalized patient management. However, our results need to be comprehensively assessed in consideration of other clinical parameters. MDPI 2022-12-30 /pmc/articles/PMC9818199/ /pubmed/36611413 http://dx.doi.org/10.3390/diagnostics13010121 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Salamaikina, Svetlana
Karnaushkina, Maria
Korchagin, Vitaly
Litvinova, Maria
Mironov, Konstantin
Akimkin, Vasily
TLRs Gene Polymorphisms Associated with Pneumonia before and during COVID-19 Pandemic
title TLRs Gene Polymorphisms Associated with Pneumonia before and during COVID-19 Pandemic
title_full TLRs Gene Polymorphisms Associated with Pneumonia before and during COVID-19 Pandemic
title_fullStr TLRs Gene Polymorphisms Associated with Pneumonia before and during COVID-19 Pandemic
title_full_unstemmed TLRs Gene Polymorphisms Associated with Pneumonia before and during COVID-19 Pandemic
title_short TLRs Gene Polymorphisms Associated with Pneumonia before and during COVID-19 Pandemic
title_sort tlrs gene polymorphisms associated with pneumonia before and during covid-19 pandemic
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9818199/
https://www.ncbi.nlm.nih.gov/pubmed/36611413
http://dx.doi.org/10.3390/diagnostics13010121
work_keys_str_mv AT salamaikinasvetlana tlrsgenepolymorphismsassociatedwithpneumoniabeforeandduringcovid19pandemic
AT karnaushkinamaria tlrsgenepolymorphismsassociatedwithpneumoniabeforeandduringcovid19pandemic
AT korchaginvitaly tlrsgenepolymorphismsassociatedwithpneumoniabeforeandduringcovid19pandemic
AT litvinovamaria tlrsgenepolymorphismsassociatedwithpneumoniabeforeandduringcovid19pandemic
AT mironovkonstantin tlrsgenepolymorphismsassociatedwithpneumoniabeforeandduringcovid19pandemic
AT akimkinvasily tlrsgenepolymorphismsassociatedwithpneumoniabeforeandduringcovid19pandemic