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Efficient Breast Cancer Classification Network with Dual Squeeze and Excitation in Histopathological Images
Medical image analysis methods for mammograms, ultrasound, and magnetic resonance imaging (MRI) cannot provide the underline features on the cellular level to understand the cancer microenvironment which makes them unsuitable for breast cancer subtype classification study. In this paper, we propose...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9818943/ https://www.ncbi.nlm.nih.gov/pubmed/36611396 http://dx.doi.org/10.3390/diagnostics13010103 |
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author | Sarker, Md. Mostafa Kamal Akram, Farhan Alsharid, Mohammad Singh, Vivek Kumar Yasrab, Robail Elyan, Eyad |
author_facet | Sarker, Md. Mostafa Kamal Akram, Farhan Alsharid, Mohammad Singh, Vivek Kumar Yasrab, Robail Elyan, Eyad |
author_sort | Sarker, Md. Mostafa Kamal |
collection | PubMed |
description | Medical image analysis methods for mammograms, ultrasound, and magnetic resonance imaging (MRI) cannot provide the underline features on the cellular level to understand the cancer microenvironment which makes them unsuitable for breast cancer subtype classification study. In this paper, we propose a convolutional neural network (CNN)-based breast cancer classification method for hematoxylin and eosin ([Formula: see text]) whole slide images (WSIs). The proposed method incorporates fused mobile inverted bottleneck convolutions (FMB-Conv) and mobile inverted bottleneck convolutions (MBConv) with a dual squeeze and excitation (DSE) network to accurately classify breast cancer tissue into binary (benign and malignant) and eight subtypes using histopathology images. For that, a pre-trained EfficientNetV2 network is used as a backbone with a modified DSE block that combines the spatial and channel-wise squeeze and excitation layers to highlight important low-level and high-level abstract features. Our method outperformed ResNet101, InceptionResNetV2, and EfficientNetV2 networks on the publicly available BreakHis dataset for the binary and multi-class breast cancer classification in terms of precision, recall, and F1-score on multiple magnification levels. |
format | Online Article Text |
id | pubmed-9818943 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-98189432023-01-07 Efficient Breast Cancer Classification Network with Dual Squeeze and Excitation in Histopathological Images Sarker, Md. Mostafa Kamal Akram, Farhan Alsharid, Mohammad Singh, Vivek Kumar Yasrab, Robail Elyan, Eyad Diagnostics (Basel) Article Medical image analysis methods for mammograms, ultrasound, and magnetic resonance imaging (MRI) cannot provide the underline features on the cellular level to understand the cancer microenvironment which makes them unsuitable for breast cancer subtype classification study. In this paper, we propose a convolutional neural network (CNN)-based breast cancer classification method for hematoxylin and eosin ([Formula: see text]) whole slide images (WSIs). The proposed method incorporates fused mobile inverted bottleneck convolutions (FMB-Conv) and mobile inverted bottleneck convolutions (MBConv) with a dual squeeze and excitation (DSE) network to accurately classify breast cancer tissue into binary (benign and malignant) and eight subtypes using histopathology images. For that, a pre-trained EfficientNetV2 network is used as a backbone with a modified DSE block that combines the spatial and channel-wise squeeze and excitation layers to highlight important low-level and high-level abstract features. Our method outperformed ResNet101, InceptionResNetV2, and EfficientNetV2 networks on the publicly available BreakHis dataset for the binary and multi-class breast cancer classification in terms of precision, recall, and F1-score on multiple magnification levels. MDPI 2022-12-29 /pmc/articles/PMC9818943/ /pubmed/36611396 http://dx.doi.org/10.3390/diagnostics13010103 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Sarker, Md. Mostafa Kamal Akram, Farhan Alsharid, Mohammad Singh, Vivek Kumar Yasrab, Robail Elyan, Eyad Efficient Breast Cancer Classification Network with Dual Squeeze and Excitation in Histopathological Images |
title | Efficient Breast Cancer Classification Network with Dual Squeeze and Excitation in Histopathological Images |
title_full | Efficient Breast Cancer Classification Network with Dual Squeeze and Excitation in Histopathological Images |
title_fullStr | Efficient Breast Cancer Classification Network with Dual Squeeze and Excitation in Histopathological Images |
title_full_unstemmed | Efficient Breast Cancer Classification Network with Dual Squeeze and Excitation in Histopathological Images |
title_short | Efficient Breast Cancer Classification Network with Dual Squeeze and Excitation in Histopathological Images |
title_sort | efficient breast cancer classification network with dual squeeze and excitation in histopathological images |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9818943/ https://www.ncbi.nlm.nih.gov/pubmed/36611396 http://dx.doi.org/10.3390/diagnostics13010103 |
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