Cargando…

Efficient Breast Cancer Classification Network with Dual Squeeze and Excitation in Histopathological Images

Medical image analysis methods for mammograms, ultrasound, and magnetic resonance imaging (MRI) cannot provide the underline features on the cellular level to understand the cancer microenvironment which makes them unsuitable for breast cancer subtype classification study. In this paper, we propose...

Descripción completa

Detalles Bibliográficos
Autores principales: Sarker, Md. Mostafa Kamal, Akram, Farhan, Alsharid, Mohammad, Singh, Vivek Kumar, Yasrab, Robail, Elyan, Eyad
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9818943/
https://www.ncbi.nlm.nih.gov/pubmed/36611396
http://dx.doi.org/10.3390/diagnostics13010103
_version_ 1784865109629206528
author Sarker, Md. Mostafa Kamal
Akram, Farhan
Alsharid, Mohammad
Singh, Vivek Kumar
Yasrab, Robail
Elyan, Eyad
author_facet Sarker, Md. Mostafa Kamal
Akram, Farhan
Alsharid, Mohammad
Singh, Vivek Kumar
Yasrab, Robail
Elyan, Eyad
author_sort Sarker, Md. Mostafa Kamal
collection PubMed
description Medical image analysis methods for mammograms, ultrasound, and magnetic resonance imaging (MRI) cannot provide the underline features on the cellular level to understand the cancer microenvironment which makes them unsuitable for breast cancer subtype classification study. In this paper, we propose a convolutional neural network (CNN)-based breast cancer classification method for hematoxylin and eosin ([Formula: see text]) whole slide images (WSIs). The proposed method incorporates fused mobile inverted bottleneck convolutions (FMB-Conv) and mobile inverted bottleneck convolutions (MBConv) with a dual squeeze and excitation (DSE) network to accurately classify breast cancer tissue into binary (benign and malignant) and eight subtypes using histopathology images. For that, a pre-trained EfficientNetV2 network is used as a backbone with a modified DSE block that combines the spatial and channel-wise squeeze and excitation layers to highlight important low-level and high-level abstract features. Our method outperformed ResNet101, InceptionResNetV2, and EfficientNetV2 networks on the publicly available BreakHis dataset for the binary and multi-class breast cancer classification in terms of precision, recall, and F1-score on multiple magnification levels.
format Online
Article
Text
id pubmed-9818943
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-98189432023-01-07 Efficient Breast Cancer Classification Network with Dual Squeeze and Excitation in Histopathological Images Sarker, Md. Mostafa Kamal Akram, Farhan Alsharid, Mohammad Singh, Vivek Kumar Yasrab, Robail Elyan, Eyad Diagnostics (Basel) Article Medical image analysis methods for mammograms, ultrasound, and magnetic resonance imaging (MRI) cannot provide the underline features on the cellular level to understand the cancer microenvironment which makes them unsuitable for breast cancer subtype classification study. In this paper, we propose a convolutional neural network (CNN)-based breast cancer classification method for hematoxylin and eosin ([Formula: see text]) whole slide images (WSIs). The proposed method incorporates fused mobile inverted bottleneck convolutions (FMB-Conv) and mobile inverted bottleneck convolutions (MBConv) with a dual squeeze and excitation (DSE) network to accurately classify breast cancer tissue into binary (benign and malignant) and eight subtypes using histopathology images. For that, a pre-trained EfficientNetV2 network is used as a backbone with a modified DSE block that combines the spatial and channel-wise squeeze and excitation layers to highlight important low-level and high-level abstract features. Our method outperformed ResNet101, InceptionResNetV2, and EfficientNetV2 networks on the publicly available BreakHis dataset for the binary and multi-class breast cancer classification in terms of precision, recall, and F1-score on multiple magnification levels. MDPI 2022-12-29 /pmc/articles/PMC9818943/ /pubmed/36611396 http://dx.doi.org/10.3390/diagnostics13010103 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Sarker, Md. Mostafa Kamal
Akram, Farhan
Alsharid, Mohammad
Singh, Vivek Kumar
Yasrab, Robail
Elyan, Eyad
Efficient Breast Cancer Classification Network with Dual Squeeze and Excitation in Histopathological Images
title Efficient Breast Cancer Classification Network with Dual Squeeze and Excitation in Histopathological Images
title_full Efficient Breast Cancer Classification Network with Dual Squeeze and Excitation in Histopathological Images
title_fullStr Efficient Breast Cancer Classification Network with Dual Squeeze and Excitation in Histopathological Images
title_full_unstemmed Efficient Breast Cancer Classification Network with Dual Squeeze and Excitation in Histopathological Images
title_short Efficient Breast Cancer Classification Network with Dual Squeeze and Excitation in Histopathological Images
title_sort efficient breast cancer classification network with dual squeeze and excitation in histopathological images
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9818943/
https://www.ncbi.nlm.nih.gov/pubmed/36611396
http://dx.doi.org/10.3390/diagnostics13010103
work_keys_str_mv AT sarkermdmostafakamal efficientbreastcancerclassificationnetworkwithdualsqueezeandexcitationinhistopathologicalimages
AT akramfarhan efficientbreastcancerclassificationnetworkwithdualsqueezeandexcitationinhistopathologicalimages
AT alsharidmohammad efficientbreastcancerclassificationnetworkwithdualsqueezeandexcitationinhistopathologicalimages
AT singhvivekkumar efficientbreastcancerclassificationnetworkwithdualsqueezeandexcitationinhistopathologicalimages
AT yasrabrobail efficientbreastcancerclassificationnetworkwithdualsqueezeandexcitationinhistopathologicalimages
AT elyaneyad efficientbreastcancerclassificationnetworkwithdualsqueezeandexcitationinhistopathologicalimages