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A Genome-Wide Association Study of 2304 Extreme Longevity Cases Identifies Novel Longevity Variants

We performed a genome-wide association study (GWAS) of human extreme longevity (EL), defined as surviving past the 99th survival percentile, by aggregating data from four centenarian studies. The combined data included 2304 EL cases and 5879 controls. The analysis identified a locus in CDKN2B-AS1 (r...

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Autores principales: Bae, Harold, Gurinovich, Anastasia, Karagiannis, Tanya T., Song, Zeyuan, Leshchyk, Anastasia, Li, Mengze, Andersen, Stacy L., Arbeev, Konstantin, Yashin, Anatoliy, Zmuda, Joseph, An, Ping, Feitosa, Mary, Giuliani, Cristina, Franceschi, Claudio, Garagnani, Paolo, Mengel-From, Jonas, Atzmon, Gil, Barzilai, Nir, Puca, Annibale, Schork, Nicholas J., Perls, Thomas T., Sebastiani, Paola
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9820206/
https://www.ncbi.nlm.nih.gov/pubmed/36613555
http://dx.doi.org/10.3390/ijms24010116
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author Bae, Harold
Gurinovich, Anastasia
Karagiannis, Tanya T.
Song, Zeyuan
Leshchyk, Anastasia
Li, Mengze
Andersen, Stacy L.
Arbeev, Konstantin
Yashin, Anatoliy
Zmuda, Joseph
An, Ping
Feitosa, Mary
Giuliani, Cristina
Franceschi, Claudio
Garagnani, Paolo
Mengel-From, Jonas
Atzmon, Gil
Barzilai, Nir
Puca, Annibale
Schork, Nicholas J.
Perls, Thomas T.
Sebastiani, Paola
author_facet Bae, Harold
Gurinovich, Anastasia
Karagiannis, Tanya T.
Song, Zeyuan
Leshchyk, Anastasia
Li, Mengze
Andersen, Stacy L.
Arbeev, Konstantin
Yashin, Anatoliy
Zmuda, Joseph
An, Ping
Feitosa, Mary
Giuliani, Cristina
Franceschi, Claudio
Garagnani, Paolo
Mengel-From, Jonas
Atzmon, Gil
Barzilai, Nir
Puca, Annibale
Schork, Nicholas J.
Perls, Thomas T.
Sebastiani, Paola
author_sort Bae, Harold
collection PubMed
description We performed a genome-wide association study (GWAS) of human extreme longevity (EL), defined as surviving past the 99th survival percentile, by aggregating data from four centenarian studies. The combined data included 2304 EL cases and 5879 controls. The analysis identified a locus in CDKN2B-AS1 (rs6475609, p = 7.13 × 10(−8)) that almost reached genome-wide significance and four additional loci that were suggestively significant. Among these, a novel rare variant (rs145265196) on chromosome 11 had much higher longevity allele frequencies in cases of Ashkenazi Jewish and Southern Italian ancestry compared to cases of other European ancestries. We also correlated EL-associated SNPs with serum proteins to link our findings to potential biological mechanisms that may be related to EL and are under genetic regulation. The findings from the proteomic analyses suggested that longevity-promoting alleles of significant genetic variants either provided EL cases with more youthful molecular profiles compared to controls or provided some form of protection from other illnesses, such as Alzheimer’s disease, and disease progressions.
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spelling pubmed-98202062023-01-07 A Genome-Wide Association Study of 2304 Extreme Longevity Cases Identifies Novel Longevity Variants Bae, Harold Gurinovich, Anastasia Karagiannis, Tanya T. Song, Zeyuan Leshchyk, Anastasia Li, Mengze Andersen, Stacy L. Arbeev, Konstantin Yashin, Anatoliy Zmuda, Joseph An, Ping Feitosa, Mary Giuliani, Cristina Franceschi, Claudio Garagnani, Paolo Mengel-From, Jonas Atzmon, Gil Barzilai, Nir Puca, Annibale Schork, Nicholas J. Perls, Thomas T. Sebastiani, Paola Int J Mol Sci Article We performed a genome-wide association study (GWAS) of human extreme longevity (EL), defined as surviving past the 99th survival percentile, by aggregating data from four centenarian studies. The combined data included 2304 EL cases and 5879 controls. The analysis identified a locus in CDKN2B-AS1 (rs6475609, p = 7.13 × 10(−8)) that almost reached genome-wide significance and four additional loci that were suggestively significant. Among these, a novel rare variant (rs145265196) on chromosome 11 had much higher longevity allele frequencies in cases of Ashkenazi Jewish and Southern Italian ancestry compared to cases of other European ancestries. We also correlated EL-associated SNPs with serum proteins to link our findings to potential biological mechanisms that may be related to EL and are under genetic regulation. The findings from the proteomic analyses suggested that longevity-promoting alleles of significant genetic variants either provided EL cases with more youthful molecular profiles compared to controls or provided some form of protection from other illnesses, such as Alzheimer’s disease, and disease progressions. MDPI 2022-12-21 /pmc/articles/PMC9820206/ /pubmed/36613555 http://dx.doi.org/10.3390/ijms24010116 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Bae, Harold
Gurinovich, Anastasia
Karagiannis, Tanya T.
Song, Zeyuan
Leshchyk, Anastasia
Li, Mengze
Andersen, Stacy L.
Arbeev, Konstantin
Yashin, Anatoliy
Zmuda, Joseph
An, Ping
Feitosa, Mary
Giuliani, Cristina
Franceschi, Claudio
Garagnani, Paolo
Mengel-From, Jonas
Atzmon, Gil
Barzilai, Nir
Puca, Annibale
Schork, Nicholas J.
Perls, Thomas T.
Sebastiani, Paola
A Genome-Wide Association Study of 2304 Extreme Longevity Cases Identifies Novel Longevity Variants
title A Genome-Wide Association Study of 2304 Extreme Longevity Cases Identifies Novel Longevity Variants
title_full A Genome-Wide Association Study of 2304 Extreme Longevity Cases Identifies Novel Longevity Variants
title_fullStr A Genome-Wide Association Study of 2304 Extreme Longevity Cases Identifies Novel Longevity Variants
title_full_unstemmed A Genome-Wide Association Study of 2304 Extreme Longevity Cases Identifies Novel Longevity Variants
title_short A Genome-Wide Association Study of 2304 Extreme Longevity Cases Identifies Novel Longevity Variants
title_sort genome-wide association study of 2304 extreme longevity cases identifies novel longevity variants
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9820206/
https://www.ncbi.nlm.nih.gov/pubmed/36613555
http://dx.doi.org/10.3390/ijms24010116
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