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A Genome-Wide Association Study of 2304 Extreme Longevity Cases Identifies Novel Longevity Variants
We performed a genome-wide association study (GWAS) of human extreme longevity (EL), defined as surviving past the 99th survival percentile, by aggregating data from four centenarian studies. The combined data included 2304 EL cases and 5879 controls. The analysis identified a locus in CDKN2B-AS1 (r...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9820206/ https://www.ncbi.nlm.nih.gov/pubmed/36613555 http://dx.doi.org/10.3390/ijms24010116 |
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author | Bae, Harold Gurinovich, Anastasia Karagiannis, Tanya T. Song, Zeyuan Leshchyk, Anastasia Li, Mengze Andersen, Stacy L. Arbeev, Konstantin Yashin, Anatoliy Zmuda, Joseph An, Ping Feitosa, Mary Giuliani, Cristina Franceschi, Claudio Garagnani, Paolo Mengel-From, Jonas Atzmon, Gil Barzilai, Nir Puca, Annibale Schork, Nicholas J. Perls, Thomas T. Sebastiani, Paola |
author_facet | Bae, Harold Gurinovich, Anastasia Karagiannis, Tanya T. Song, Zeyuan Leshchyk, Anastasia Li, Mengze Andersen, Stacy L. Arbeev, Konstantin Yashin, Anatoliy Zmuda, Joseph An, Ping Feitosa, Mary Giuliani, Cristina Franceschi, Claudio Garagnani, Paolo Mengel-From, Jonas Atzmon, Gil Barzilai, Nir Puca, Annibale Schork, Nicholas J. Perls, Thomas T. Sebastiani, Paola |
author_sort | Bae, Harold |
collection | PubMed |
description | We performed a genome-wide association study (GWAS) of human extreme longevity (EL), defined as surviving past the 99th survival percentile, by aggregating data from four centenarian studies. The combined data included 2304 EL cases and 5879 controls. The analysis identified a locus in CDKN2B-AS1 (rs6475609, p = 7.13 × 10(−8)) that almost reached genome-wide significance and four additional loci that were suggestively significant. Among these, a novel rare variant (rs145265196) on chromosome 11 had much higher longevity allele frequencies in cases of Ashkenazi Jewish and Southern Italian ancestry compared to cases of other European ancestries. We also correlated EL-associated SNPs with serum proteins to link our findings to potential biological mechanisms that may be related to EL and are under genetic regulation. The findings from the proteomic analyses suggested that longevity-promoting alleles of significant genetic variants either provided EL cases with more youthful molecular profiles compared to controls or provided some form of protection from other illnesses, such as Alzheimer’s disease, and disease progressions. |
format | Online Article Text |
id | pubmed-9820206 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-98202062023-01-07 A Genome-Wide Association Study of 2304 Extreme Longevity Cases Identifies Novel Longevity Variants Bae, Harold Gurinovich, Anastasia Karagiannis, Tanya T. Song, Zeyuan Leshchyk, Anastasia Li, Mengze Andersen, Stacy L. Arbeev, Konstantin Yashin, Anatoliy Zmuda, Joseph An, Ping Feitosa, Mary Giuliani, Cristina Franceschi, Claudio Garagnani, Paolo Mengel-From, Jonas Atzmon, Gil Barzilai, Nir Puca, Annibale Schork, Nicholas J. Perls, Thomas T. Sebastiani, Paola Int J Mol Sci Article We performed a genome-wide association study (GWAS) of human extreme longevity (EL), defined as surviving past the 99th survival percentile, by aggregating data from four centenarian studies. The combined data included 2304 EL cases and 5879 controls. The analysis identified a locus in CDKN2B-AS1 (rs6475609, p = 7.13 × 10(−8)) that almost reached genome-wide significance and four additional loci that were suggestively significant. Among these, a novel rare variant (rs145265196) on chromosome 11 had much higher longevity allele frequencies in cases of Ashkenazi Jewish and Southern Italian ancestry compared to cases of other European ancestries. We also correlated EL-associated SNPs with serum proteins to link our findings to potential biological mechanisms that may be related to EL and are under genetic regulation. The findings from the proteomic analyses suggested that longevity-promoting alleles of significant genetic variants either provided EL cases with more youthful molecular profiles compared to controls or provided some form of protection from other illnesses, such as Alzheimer’s disease, and disease progressions. MDPI 2022-12-21 /pmc/articles/PMC9820206/ /pubmed/36613555 http://dx.doi.org/10.3390/ijms24010116 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Bae, Harold Gurinovich, Anastasia Karagiannis, Tanya T. Song, Zeyuan Leshchyk, Anastasia Li, Mengze Andersen, Stacy L. Arbeev, Konstantin Yashin, Anatoliy Zmuda, Joseph An, Ping Feitosa, Mary Giuliani, Cristina Franceschi, Claudio Garagnani, Paolo Mengel-From, Jonas Atzmon, Gil Barzilai, Nir Puca, Annibale Schork, Nicholas J. Perls, Thomas T. Sebastiani, Paola A Genome-Wide Association Study of 2304 Extreme Longevity Cases Identifies Novel Longevity Variants |
title | A Genome-Wide Association Study of 2304 Extreme Longevity Cases Identifies Novel Longevity Variants |
title_full | A Genome-Wide Association Study of 2304 Extreme Longevity Cases Identifies Novel Longevity Variants |
title_fullStr | A Genome-Wide Association Study of 2304 Extreme Longevity Cases Identifies Novel Longevity Variants |
title_full_unstemmed | A Genome-Wide Association Study of 2304 Extreme Longevity Cases Identifies Novel Longevity Variants |
title_short | A Genome-Wide Association Study of 2304 Extreme Longevity Cases Identifies Novel Longevity Variants |
title_sort | genome-wide association study of 2304 extreme longevity cases identifies novel longevity variants |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9820206/ https://www.ncbi.nlm.nih.gov/pubmed/36613555 http://dx.doi.org/10.3390/ijms24010116 |
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