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Projecting COVID-19 cases and hospital burden in Ohio

As the Coronavirus 2019 disease (COVID-19) started to spread rapidly in the state of Ohio, the Ecology, Epidemiology and Population Health (EEPH) program within the Infectious Diseases Institute (IDI) at The Ohio State University (OSU) took the initiative to offer epidemic modeling and decision anal...

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Autores principales: KhudaBukhsh, Wasiur R., Bastian, Caleb Deen, Wascher, Matthew, Klaus, Colin, Sahai, Saumya Yashmohini, Weir, Mark H., Kenah, Eben, Root, Elisabeth, Tien, Joseph H., Rempała, Grzegorz A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Author(s). Published by Elsevier Ltd. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9824941/
https://www.ncbi.nlm.nih.gov/pubmed/36627078
http://dx.doi.org/10.1016/j.jtbi.2022.111404
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author KhudaBukhsh, Wasiur R.
Bastian, Caleb Deen
Wascher, Matthew
Klaus, Colin
Sahai, Saumya Yashmohini
Weir, Mark H.
Kenah, Eben
Root, Elisabeth
Tien, Joseph H.
Rempała, Grzegorz A.
author_facet KhudaBukhsh, Wasiur R.
Bastian, Caleb Deen
Wascher, Matthew
Klaus, Colin
Sahai, Saumya Yashmohini
Weir, Mark H.
Kenah, Eben
Root, Elisabeth
Tien, Joseph H.
Rempała, Grzegorz A.
author_sort KhudaBukhsh, Wasiur R.
collection PubMed
description As the Coronavirus 2019 disease (COVID-19) started to spread rapidly in the state of Ohio, the Ecology, Epidemiology and Population Health (EEPH) program within the Infectious Diseases Institute (IDI) at The Ohio State University (OSU) took the initiative to offer epidemic modeling and decision analytics support to the Ohio Department of Health (ODH). This paper describes the methodology used by the OSU/IDI response modeling team to predict statewide cases of new infections as well as potential hospital burden in the state. The methodology has two components: (1) A Dynamical Survival Analysis (DSA)-based statistical method to perform parameter inference, statewide prediction and uncertainty quantification. (2) A geographic component that down-projects statewide predicted counts to potential hospital burden across the state. We demonstrate the overall methodology with publicly available data. A Python implementation of the methodology is also made publicly available. This manuscript was submitted as part of a theme issue on “Modelling COVID-19 and Preparedness for Future Pandemics”.
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spelling pubmed-98249412023-01-09 Projecting COVID-19 cases and hospital burden in Ohio KhudaBukhsh, Wasiur R. Bastian, Caleb Deen Wascher, Matthew Klaus, Colin Sahai, Saumya Yashmohini Weir, Mark H. Kenah, Eben Root, Elisabeth Tien, Joseph H. Rempała, Grzegorz A. J Theor Biol Article As the Coronavirus 2019 disease (COVID-19) started to spread rapidly in the state of Ohio, the Ecology, Epidemiology and Population Health (EEPH) program within the Infectious Diseases Institute (IDI) at The Ohio State University (OSU) took the initiative to offer epidemic modeling and decision analytics support to the Ohio Department of Health (ODH). This paper describes the methodology used by the OSU/IDI response modeling team to predict statewide cases of new infections as well as potential hospital burden in the state. The methodology has two components: (1) A Dynamical Survival Analysis (DSA)-based statistical method to perform parameter inference, statewide prediction and uncertainty quantification. (2) A geographic component that down-projects statewide predicted counts to potential hospital burden across the state. We demonstrate the overall methodology with publicly available data. A Python implementation of the methodology is also made publicly available. This manuscript was submitted as part of a theme issue on “Modelling COVID-19 and Preparedness for Future Pandemics”. The Author(s). Published by Elsevier Ltd. 2023-03-21 2023-01-07 /pmc/articles/PMC9824941/ /pubmed/36627078 http://dx.doi.org/10.1016/j.jtbi.2022.111404 Text en © 2023 The Author(s) Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
KhudaBukhsh, Wasiur R.
Bastian, Caleb Deen
Wascher, Matthew
Klaus, Colin
Sahai, Saumya Yashmohini
Weir, Mark H.
Kenah, Eben
Root, Elisabeth
Tien, Joseph H.
Rempała, Grzegorz A.
Projecting COVID-19 cases and hospital burden in Ohio
title Projecting COVID-19 cases and hospital burden in Ohio
title_full Projecting COVID-19 cases and hospital burden in Ohio
title_fullStr Projecting COVID-19 cases and hospital burden in Ohio
title_full_unstemmed Projecting COVID-19 cases and hospital burden in Ohio
title_short Projecting COVID-19 cases and hospital burden in Ohio
title_sort projecting covid-19 cases and hospital burden in ohio
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9824941/
https://www.ncbi.nlm.nih.gov/pubmed/36627078
http://dx.doi.org/10.1016/j.jtbi.2022.111404
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