Cargando…

Structural transitions during the cooperative assembly of baculovirus single-stranded DNA-binding protein on ssDNA

Single-stranded DNA-binding proteins (SSBs) interact with single-stranded DNA (ssDNA) to form filamentous structures with various degrees of cooperativity, as a result of intermolecular interactions between neighboring SSB subunits on ssDNA. However, it is still challenging to perform structural stu...

Descripción completa

Detalles Bibliográficos
Autores principales:	Yin, Jiayi, Fu, Yan, Rao, Guibo, Li, Zhiqiang, Tian, Kexing, Chong, Tingting, Kuang, Kai, Wang, Manli, Hu, Zhihong, Cao, Sheng
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2022
Materias:	Structural Biology
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9825184/ https://www.ncbi.nlm.nih.gov/pubmed/36477586 http://dx.doi.org/10.1093/nar/gkac1142

Ejemplares similares

Details of ssDNA annealing revealed by an HSV-1 ICP8–ssDNA binary complex
por: Tolun, Gökhan, et al.
Publicado: (2013)

Probing the mechanism of recognition of ssDNA by the Cdc13-DBD
por: Eldridge, Aimee M., et al.
Publicado: (2008)

Architecture and ssDNA interaction of the Timeless-Tipin-RPA complex
por: Witosch, Justine, et al.
Publicado: (2014)

Crystal structure of DnaT(84–153)-dT10 ssDNA complex reveals a novel single-stranded DNA binding mode
por: Liu, Zheng, et al.
Publicado: (2014)

Molecular determinants of the DprA−RecA interaction for nucleation on ssDNA
por: Lisboa, Johnny, et al.
Publicado: (2014)

An ‘open’ structure of the RecOR complex supports ssDNA binding within the core of the complex
por: Radzimanowski, Jens, et al.
Publicado: (2013)

Structure of mycobacterial 3′-to-5′ RNA:DNA helicase Lhr bound to a ssDNA tracking strand highlights distinctive features of a novel family of bacterial helicases
por: Ejaz, Anam, et al.
Publicado: (2018)

Protein oxidation increases SAMHD1 binding ssDNA via its regulatory site
por: Simermeyer, Theresa L, et al.
Publicado: (2023)

TcaR–ssDNA complex crystal structure reveals new DNA binding mechanism of the MarR family proteins
por: Chang, Yu-Ming, et al.
Publicado: (2014)

Structures of apo- and ssDNA-bound YdbC from Lactococcus lactis uncover the function of protein domain family DUF2128 and expand the single-stranded DNA-binding domain proteome
por: Rossi, Paolo, et al.
Publicado: (2013)

Analysis of the XPA and ssDNA-binding surfaces on the central domain of human ERCC1 reveals evidence for subfunctionalization
por: Tripsianes, Konstantinos, et al.
Publicado: (2007)

‘Drc’, a structurally novel ssDNA-binding transcription regulator of N4-related bacterial viruses
por: Boon, Maarten, et al.
Publicado: (2020)

Structure of the human RAD17–RFC clamp loader and 9–1–1 checkpoint clamp bound to a dsDNA–ssDNA junction
por: Day, Matthew, et al.
Publicado: (2022)

Surface plasmon resonance imaging reveals multiple binding modes of Agrobacterium transformation mediator VirE2 to ssDNA
por: Kim, Sanghyun, et al.
Publicado: (2015)

Crystal structure of the DdrB/ssDNA complex from Deinococcus radiodurans reveals a DNA binding surface involving higher-order oligomeric states
por: Sugiman-Marangos, Seiji N., et al.
Publicado: (2013)

Biotechnological production of ssDNA with DNA-hydrolyzing deoxyribozymes
por: Liu, Jin, et al.
Publicado: (2021)

RecOR complex including RecR N-N dimer and RecO monomer displays a high affinity for ssDNA
por: Tang, Qun, et al.
Publicado: (2012)

The Borrelia burgdorferi telomere resolvase, ResT, anneals ssDNA complexed with its cognate ssDNA-binding protein
por: Huang, Shu Hui, et al.
Publicado: (2016)

Mechanochemical regulations of RPA's binding to ssDNA
por: Chen, Jin, et al.
Publicado: (2015)

Acousto-microfluidics for screening of ssDNA aptamer
por: Park, Jee-Woong, et al.
Publicado: (2016)

Structural insight into the length-dependent binding of ssDNA by SP_0782 from Streptococcus pneumoniae, reveals a divergence in the DNA-binding interface of PC4-like proteins
por: Li, Shuangli, et al.
Publicado: (2020)

Protein dynamics during presynaptic complex assembly on individual ssDNA molecules
por: Gibb, Bryan, et al.
Publicado: (2014)

Structure, stability and specificity of the binding of ssDNA and ssRNA with proteins
por: Pal, Arumay, et al.
Publicado: (2019)

The Cryo-EM structure of AAV2 Rep68 in complex with ssDNA reveals a malleable AAA(+) machine that can switch between oligomeric states
por: Santosh, Vishaka, et al.
Publicado: (2020)

Biostable ssDNA Aptamers Specific for Hodgkin Lymphoma
por: Parekh, Parag, et al.
Publicado: (2013)

A comparative study of protein–ssDNA interactions
por: Lin, Maoxuan, et al.
Publicado: (2021)

Single-molecule FRET studies of the cooperative and non-cooperative binding kinetics of the bacteriophage T4 single-stranded DNA binding protein (gp32) to ssDNA lattices at replication fork junctions
por: Lee, Wonbae, et al.
Publicado: (2016)

Dna2 processes behind the fork long ssDNA flaps generated by Pif1 and replication-dependent strand displacement
por: Rossi, Silvia Emma, et al.
Publicado: (2018)

Cooperativity-based modeling of heterotypic DNA nanostructure assembly
por: Shapiro, Anastasia, et al.
Publicado: (2015)

RPA homologs and ssDNA processing during meiotic recombination
por: Ribeiro, Jonathan, et al.
Publicado: (2015)

Intrinsic Stepwise Translocation of Stretched ssDNA in Graphene Nanopores
por: Qiu, Hu, et al.
Publicado: (2015)

Screening and Identification of ssDNA Aptamer for Human GP73
por: Du, Jingchun, et al.
Publicado: (2015)

Selection and targeting of EpCAM protein by ssDNA aptamer
por: Alshaer, Walhan, et al.
Publicado: (2017)

Selection, Characterization, and Application of ssDNA Aptamer against Furaneol
por: Komarova, Natalia, et al.
Publicado: (2018)

DSS1 and ssDNA regulate oligomerization of BRCA2
por: Le, Hang Phuong, et al.
Publicado: (2020)

Selection and identification of an ssDNA aptamer to NB4 cell
por: Zhang, Xian‐hui, et al.
Publicado: (2021)

Selection and Identification of an ssDNA Aptamer for Fibroblast Activation Protein
por: Zhang, Xiaomin, et al.
Publicado: (2023)

Protein splicing of a recombinase intein induced by ssDNA and DNA damage
por: Lennon, Christopher W., et al.
Publicado: (2016)

Deciphering the mechanism of processive ssDNA digestion by the Dna2-RPA ensemble
por: Shen, Jiangchuan, et al.
Publicado: (2022)

Comparative studies on the interaction of anticancer drug irinotecan with dsDNA and ssDNA
por: Temerk, Yassien, et al.
Publicado: (2018)

Cannot write session to /tmp/vufind_sessions/sess_kcn189hd271er4jcqruqnpeall