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igv.js: an embeddable JavaScript implementation of the Integrative Genomics Viewer (IGV)

SUMMARY: igv.js is an embeddable JavaScript implementation of the Integrative Genomics Viewer (IGV). It can be easily dropped into any web page with a single line of code and has no external dependencies. The viewer runs completely in the web browser, with no backend server and no data pre-processin...

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Detalles Bibliográficos
Autores principales: Robinson, James T, Thorvaldsdottir, Helga, Turner, Douglass, Mesirov, Jill P
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9825295/
https://www.ncbi.nlm.nih.gov/pubmed/36562559
http://dx.doi.org/10.1093/bioinformatics/btac830
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author Robinson, James T
Thorvaldsdottir, Helga
Turner, Douglass
Mesirov, Jill P
author_facet Robinson, James T
Thorvaldsdottir, Helga
Turner, Douglass
Mesirov, Jill P
author_sort Robinson, James T
collection PubMed
description SUMMARY: igv.js is an embeddable JavaScript implementation of the Integrative Genomics Viewer (IGV). It can be easily dropped into any web page with a single line of code and has no external dependencies. The viewer runs completely in the web browser, with no backend server and no data pre-processing required. AVAILABILITY AND IMPLEMENTATION: The igv.js JavaScript component can be installed from NPM at https://www.npmjs.com/package/igv. The source code is available at https://github.com/igvteam/igv.js under the MIT open-source license. IGV-Web, the end-user application built around igv.js, is available at https://igv.org/app. The source code is available at https://github.com/igvteam/igv-webapp under the MIT open-source license. SUPPLEMENTARY INFORMATION: Supplementary information is available at Bioinformatics online.
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spelling pubmed-98252952023-01-10 igv.js: an embeddable JavaScript implementation of the Integrative Genomics Viewer (IGV) Robinson, James T Thorvaldsdottir, Helga Turner, Douglass Mesirov, Jill P Bioinformatics Applications Note SUMMARY: igv.js is an embeddable JavaScript implementation of the Integrative Genomics Viewer (IGV). It can be easily dropped into any web page with a single line of code and has no external dependencies. The viewer runs completely in the web browser, with no backend server and no data pre-processing required. AVAILABILITY AND IMPLEMENTATION: The igv.js JavaScript component can be installed from NPM at https://www.npmjs.com/package/igv. The source code is available at https://github.com/igvteam/igv.js under the MIT open-source license. IGV-Web, the end-user application built around igv.js, is available at https://igv.org/app. The source code is available at https://github.com/igvteam/igv-webapp under the MIT open-source license. SUPPLEMENTARY INFORMATION: Supplementary information is available at Bioinformatics online. Oxford University Press 2022-12-23 /pmc/articles/PMC9825295/ /pubmed/36562559 http://dx.doi.org/10.1093/bioinformatics/btac830 Text en © The Author(s) 2022. Published by Oxford University Press. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Applications Note
Robinson, James T
Thorvaldsdottir, Helga
Turner, Douglass
Mesirov, Jill P
igv.js: an embeddable JavaScript implementation of the Integrative Genomics Viewer (IGV)
title igv.js: an embeddable JavaScript implementation of the Integrative Genomics Viewer (IGV)
title_full igv.js: an embeddable JavaScript implementation of the Integrative Genomics Viewer (IGV)
title_fullStr igv.js: an embeddable JavaScript implementation of the Integrative Genomics Viewer (IGV)
title_full_unstemmed igv.js: an embeddable JavaScript implementation of the Integrative Genomics Viewer (IGV)
title_short igv.js: an embeddable JavaScript implementation of the Integrative Genomics Viewer (IGV)
title_sort igv.js: an embeddable javascript implementation of the integrative genomics viewer (igv)
topic Applications Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9825295/
https://www.ncbi.nlm.nih.gov/pubmed/36562559
http://dx.doi.org/10.1093/bioinformatics/btac830
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