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Ribocentre: a database of ribozymes

Ribozymes are excellent systems in which to study ‘sequence - structure - function’ relationships in RNA molecules. Understanding these relationships may greatly help structural modeling and design of functional RNA structures and some functional structural modules could be repurposed in molecular d...

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Detalles Bibliográficos
Autores principales: Deng, Jie, Shi, Yaohuang, Peng, Xuemei, He, Yuanlin, Chen, Xiaoxue, Li, Mengxiao, Lin, Xiaowei, Liao, Wenjian, Huang, Yuanyin, Jiang, Taijiao, Lilley, David M J, Miao, Zhichao, Huang, Lin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9825448/
https://www.ncbi.nlm.nih.gov/pubmed/36177882
http://dx.doi.org/10.1093/nar/gkac840
Descripción
Sumario:Ribozymes are excellent systems in which to study ‘sequence - structure - function’ relationships in RNA molecules. Understanding these relationships may greatly help structural modeling and design of functional RNA structures and some functional structural modules could be repurposed in molecular design. At present, there is no comprehensive database summarising all the natural ribozyme families. We have therefore created Ribocentre, a database that collects together sequence, structure and mechanistic data on 21 ribozyme families. This includes available information on timelines, sequence families, secondary and tertiary structures, catalytic mechanisms, applications of the ribozymes together with key publications. The database is publicly available at https://www.ribocentre.org.