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The Chemical Probes Portal: an expert review-based public resource to empower chemical probe assessment, selection and use

We describe the Chemical Probes Portal (https://www.chemicalprobes.org/), an expert review-based public resource to empower chemical probe assessment, selection and use. Chemical probes are high-quality small-molecule reagents, often inhibitors, that are important for exploring protein function and...

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Autores principales: Antolin, Albert A, Sanfelice, Domenico, Crisp, Alisa, Villasclaras Fernandez, Eloy, Mica, Ioan L, Chen, Yi, Collins, Ian, Edwards, Aled, Müller, Susanne, Al-Lazikani, Bissan, Workman, Paul
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9825478/
https://www.ncbi.nlm.nih.gov/pubmed/36268860
http://dx.doi.org/10.1093/nar/gkac909
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author Antolin, Albert A
Sanfelice, Domenico
Crisp, Alisa
Villasclaras Fernandez, Eloy
Mica, Ioan L
Chen, Yi
Collins, Ian
Edwards, Aled
Müller, Susanne
Al-Lazikani, Bissan
Workman, Paul
author_facet Antolin, Albert A
Sanfelice, Domenico
Crisp, Alisa
Villasclaras Fernandez, Eloy
Mica, Ioan L
Chen, Yi
Collins, Ian
Edwards, Aled
Müller, Susanne
Al-Lazikani, Bissan
Workman, Paul
author_sort Antolin, Albert A
collection PubMed
description We describe the Chemical Probes Portal (https://www.chemicalprobes.org/), an expert review-based public resource to empower chemical probe assessment, selection and use. Chemical probes are high-quality small-molecule reagents, often inhibitors, that are important for exploring protein function and biological mechanisms, and for validating targets for drug discovery. The publication, dissemination and use of chemical probes provide an important means to accelerate the functional annotation of proteins, the study of proteins in cell biology, physiology, and disease pathology, and to inform and enable subsequent pioneering drug discovery and development efforts. However, the widespread use of small-molecule compounds that are claimed as chemical probes but are lacking sufficient quality, especially being inadequately selective for the desired target or even broadly promiscuous in behaviour, has resulted in many erroneous conclusions in the biomedical literature. The Chemical Probes Portal was established as a public resource to aid the selection and best-practice use of chemical probes in basic and translational biomedical research. We describe the background, principles and content of the Portal and its technical development, as well as examples of its applications and use. The Chemical Probes Portal is a community resource and we therefore describe how researchers can be involved in its content and development.
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spelling pubmed-98254782023-01-10 The Chemical Probes Portal: an expert review-based public resource to empower chemical probe assessment, selection and use Antolin, Albert A Sanfelice, Domenico Crisp, Alisa Villasclaras Fernandez, Eloy Mica, Ioan L Chen, Yi Collins, Ian Edwards, Aled Müller, Susanne Al-Lazikani, Bissan Workman, Paul Nucleic Acids Res Database Issue We describe the Chemical Probes Portal (https://www.chemicalprobes.org/), an expert review-based public resource to empower chemical probe assessment, selection and use. Chemical probes are high-quality small-molecule reagents, often inhibitors, that are important for exploring protein function and biological mechanisms, and for validating targets for drug discovery. The publication, dissemination and use of chemical probes provide an important means to accelerate the functional annotation of proteins, the study of proteins in cell biology, physiology, and disease pathology, and to inform and enable subsequent pioneering drug discovery and development efforts. However, the widespread use of small-molecule compounds that are claimed as chemical probes but are lacking sufficient quality, especially being inadequately selective for the desired target or even broadly promiscuous in behaviour, has resulted in many erroneous conclusions in the biomedical literature. The Chemical Probes Portal was established as a public resource to aid the selection and best-practice use of chemical probes in basic and translational biomedical research. We describe the background, principles and content of the Portal and its technical development, as well as examples of its applications and use. The Chemical Probes Portal is a community resource and we therefore describe how researchers can be involved in its content and development. Oxford University Press 2022-10-21 /pmc/articles/PMC9825478/ /pubmed/36268860 http://dx.doi.org/10.1093/nar/gkac909 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of Nucleic Acids Research. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Database Issue
Antolin, Albert A
Sanfelice, Domenico
Crisp, Alisa
Villasclaras Fernandez, Eloy
Mica, Ioan L
Chen, Yi
Collins, Ian
Edwards, Aled
Müller, Susanne
Al-Lazikani, Bissan
Workman, Paul
The Chemical Probes Portal: an expert review-based public resource to empower chemical probe assessment, selection and use
title The Chemical Probes Portal: an expert review-based public resource to empower chemical probe assessment, selection and use
title_full The Chemical Probes Portal: an expert review-based public resource to empower chemical probe assessment, selection and use
title_fullStr The Chemical Probes Portal: an expert review-based public resource to empower chemical probe assessment, selection and use
title_full_unstemmed The Chemical Probes Portal: an expert review-based public resource to empower chemical probe assessment, selection and use
title_short The Chemical Probes Portal: an expert review-based public resource to empower chemical probe assessment, selection and use
title_sort chemical probes portal: an expert review-based public resource to empower chemical probe assessment, selection and use
topic Database Issue
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9825478/
https://www.ncbi.nlm.nih.gov/pubmed/36268860
http://dx.doi.org/10.1093/nar/gkac909
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