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Fungal names: a comprehensive nomenclatural repository and knowledge base for fungal taxonomy

Fungal taxonomy is a complex and rapidly changing subject, which makes proper naming of fungi challenging for taxonomists. A registration platform with a standardized and information-integrated database is a powerful tool for efficient research on fungal taxonomy. Fungal Names (FN, https://nmdc.cn/f...

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Autores principales: Wang, Fang, Wang, Ke, Cai, Lei, Zhao, Mingjun, Kirk, Paul M, Fan, Guomei, Sun, Qinglan, Li, Bo, Wang, Shuai, Yu, Zhengfei, Han, Dong, Ma, Juncai, Wu, Linhuan, Yao, Yijian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9825588/
https://www.ncbi.nlm.nih.gov/pubmed/36271801
http://dx.doi.org/10.1093/nar/gkac926
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author Wang, Fang
Wang, Ke
Cai, Lei
Zhao, Mingjun
Kirk, Paul M
Fan, Guomei
Sun, Qinglan
Li, Bo
Wang, Shuai
Yu, Zhengfei
Han, Dong
Ma, Juncai
Wu, Linhuan
Yao, Yijian
author_facet Wang, Fang
Wang, Ke
Cai, Lei
Zhao, Mingjun
Kirk, Paul M
Fan, Guomei
Sun, Qinglan
Li, Bo
Wang, Shuai
Yu, Zhengfei
Han, Dong
Ma, Juncai
Wu, Linhuan
Yao, Yijian
author_sort Wang, Fang
collection PubMed
description Fungal taxonomy is a complex and rapidly changing subject, which makes proper naming of fungi challenging for taxonomists. A registration platform with a standardized and information-integrated database is a powerful tool for efficient research on fungal taxonomy. Fungal Names (FN, https://nmdc.cn/fungalnames/; launched in 2011) is one of the three official fungal nomenclatural repositories authorized by the International Nomenclature Committee for Fungi (NCF). Currently, FN includes >567 000 taxon names from >10 000 related journals and books published since 1596 and covers >147 000 collection records of type specimens/illustrations from >5000 preserving agencies. FN is also a knowledge base that integrates nomenclature information with specimens, culture collections and herbaria/fungaria, publications and taxonomists, and represents a summary of the history and recent advances in fungal taxonomy. Published fungal names are categorized based on well-accepted nomenclature rules and can be readily searched with different keywords and strategies. In combination with a standardized name checking tool and a sequence alignment-based identification package, FN makes the registration and typification of nomenclatural novelties of fungi convenient and accurate.
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spelling pubmed-98255882023-01-10 Fungal names: a comprehensive nomenclatural repository and knowledge base for fungal taxonomy Wang, Fang Wang, Ke Cai, Lei Zhao, Mingjun Kirk, Paul M Fan, Guomei Sun, Qinglan Li, Bo Wang, Shuai Yu, Zhengfei Han, Dong Ma, Juncai Wu, Linhuan Yao, Yijian Nucleic Acids Res Database Issue Fungal taxonomy is a complex and rapidly changing subject, which makes proper naming of fungi challenging for taxonomists. A registration platform with a standardized and information-integrated database is a powerful tool for efficient research on fungal taxonomy. Fungal Names (FN, https://nmdc.cn/fungalnames/; launched in 2011) is one of the three official fungal nomenclatural repositories authorized by the International Nomenclature Committee for Fungi (NCF). Currently, FN includes >567 000 taxon names from >10 000 related journals and books published since 1596 and covers >147 000 collection records of type specimens/illustrations from >5000 preserving agencies. FN is also a knowledge base that integrates nomenclature information with specimens, culture collections and herbaria/fungaria, publications and taxonomists, and represents a summary of the history and recent advances in fungal taxonomy. Published fungal names are categorized based on well-accepted nomenclature rules and can be readily searched with different keywords and strategies. In combination with a standardized name checking tool and a sequence alignment-based identification package, FN makes the registration and typification of nomenclatural novelties of fungi convenient and accurate. Oxford University Press 2022-10-22 /pmc/articles/PMC9825588/ /pubmed/36271801 http://dx.doi.org/10.1093/nar/gkac926 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of Nucleic Acids Research. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Database Issue
Wang, Fang
Wang, Ke
Cai, Lei
Zhao, Mingjun
Kirk, Paul M
Fan, Guomei
Sun, Qinglan
Li, Bo
Wang, Shuai
Yu, Zhengfei
Han, Dong
Ma, Juncai
Wu, Linhuan
Yao, Yijian
Fungal names: a comprehensive nomenclatural repository and knowledge base for fungal taxonomy
title Fungal names: a comprehensive nomenclatural repository and knowledge base for fungal taxonomy
title_full Fungal names: a comprehensive nomenclatural repository and knowledge base for fungal taxonomy
title_fullStr Fungal names: a comprehensive nomenclatural repository and knowledge base for fungal taxonomy
title_full_unstemmed Fungal names: a comprehensive nomenclatural repository and knowledge base for fungal taxonomy
title_short Fungal names: a comprehensive nomenclatural repository and knowledge base for fungal taxonomy
title_sort fungal names: a comprehensive nomenclatural repository and knowledge base for fungal taxonomy
topic Database Issue
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9825588/
https://www.ncbi.nlm.nih.gov/pubmed/36271801
http://dx.doi.org/10.1093/nar/gkac926
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