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gutMDisorder v2.0: a comprehensive database for dysbiosis of gut microbiota in phenotypes and interventions

Gut microbiota plays a significant role in maintaining host health, and conversely, disorders potentially lead to dysbiosis, an imbalance in the composition of the gut microbial community. Intervention approaches, such as medications, diets, and several others, also alter the gut microbiota in eithe...

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Autores principales: Qi, Changlu, Cai, Yiting, Qian, Kai, Li, Xuefeng, Ren, Jialiang, Wang, Ping, Fu, Tongze, Zhao, Tianyi, Cheng, Liang, Shi, Lei, Zhang, Xue
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9825589/
https://www.ncbi.nlm.nih.gov/pubmed/36215029
http://dx.doi.org/10.1093/nar/gkac871
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author Qi, Changlu
Cai, Yiting
Qian, Kai
Li, Xuefeng
Ren, Jialiang
Wang, Ping
Fu, Tongze
Zhao, Tianyi
Cheng, Liang
Shi, Lei
Zhang, Xue
author_facet Qi, Changlu
Cai, Yiting
Qian, Kai
Li, Xuefeng
Ren, Jialiang
Wang, Ping
Fu, Tongze
Zhao, Tianyi
Cheng, Liang
Shi, Lei
Zhang, Xue
author_sort Qi, Changlu
collection PubMed
description Gut microbiota plays a significant role in maintaining host health, and conversely, disorders potentially lead to dysbiosis, an imbalance in the composition of the gut microbial community. Intervention approaches, such as medications, diets, and several others, also alter the gut microbiota in either a beneficial or harmful direction. In 2020, the gutMDisorder was developed to facilitate researchers in the investigation of dysbiosis of gut microbes as occurs in various disorders as well as with therapeutic interventions. The database has been updated this year, following revision of previous publications and newly published reports to manually integrate confirmed associations under multitudinous conditions. Additionally, the microbial contents of downloaded gut microbial raw sequencing data were annotated, the metadata of the corresponding hosts were manually curated, and the interactive charts were developed to enhance visualization. The improvements have assembled into gutMDisorder v2.0, a more advanced search engine and an upgraded web interface, which can be freely accessed via http://bio-annotation.cn/gutMDisorder/.
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spelling pubmed-98255892023-01-10 gutMDisorder v2.0: a comprehensive database for dysbiosis of gut microbiota in phenotypes and interventions Qi, Changlu Cai, Yiting Qian, Kai Li, Xuefeng Ren, Jialiang Wang, Ping Fu, Tongze Zhao, Tianyi Cheng, Liang Shi, Lei Zhang, Xue Nucleic Acids Res Database Issue Gut microbiota plays a significant role in maintaining host health, and conversely, disorders potentially lead to dysbiosis, an imbalance in the composition of the gut microbial community. Intervention approaches, such as medications, diets, and several others, also alter the gut microbiota in either a beneficial or harmful direction. In 2020, the gutMDisorder was developed to facilitate researchers in the investigation of dysbiosis of gut microbes as occurs in various disorders as well as with therapeutic interventions. The database has been updated this year, following revision of previous publications and newly published reports to manually integrate confirmed associations under multitudinous conditions. Additionally, the microbial contents of downloaded gut microbial raw sequencing data were annotated, the metadata of the corresponding hosts were manually curated, and the interactive charts were developed to enhance visualization. The improvements have assembled into gutMDisorder v2.0, a more advanced search engine and an upgraded web interface, which can be freely accessed via http://bio-annotation.cn/gutMDisorder/. Oxford University Press 2022-10-10 /pmc/articles/PMC9825589/ /pubmed/36215029 http://dx.doi.org/10.1093/nar/gkac871 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of Nucleic Acids Research. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Database Issue
Qi, Changlu
Cai, Yiting
Qian, Kai
Li, Xuefeng
Ren, Jialiang
Wang, Ping
Fu, Tongze
Zhao, Tianyi
Cheng, Liang
Shi, Lei
Zhang, Xue
gutMDisorder v2.0: a comprehensive database for dysbiosis of gut microbiota in phenotypes and interventions
title gutMDisorder v2.0: a comprehensive database for dysbiosis of gut microbiota in phenotypes and interventions
title_full gutMDisorder v2.0: a comprehensive database for dysbiosis of gut microbiota in phenotypes and interventions
title_fullStr gutMDisorder v2.0: a comprehensive database for dysbiosis of gut microbiota in phenotypes and interventions
title_full_unstemmed gutMDisorder v2.0: a comprehensive database for dysbiosis of gut microbiota in phenotypes and interventions
title_short gutMDisorder v2.0: a comprehensive database for dysbiosis of gut microbiota in phenotypes and interventions
title_sort gutmdisorder v2.0: a comprehensive database for dysbiosis of gut microbiota in phenotypes and interventions
topic Database Issue
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9825589/
https://www.ncbi.nlm.nih.gov/pubmed/36215029
http://dx.doi.org/10.1093/nar/gkac871
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