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SuperNatural 3.0—a database of natural products and natural product-based derivatives
Natural products (NPs) are single chemical compounds, substances or mixtures produced by a living organism - found in nature. Evolutionarily, NPs have been used as healing agents since thousands of years and still today continue to be the most important source of new potential therapeutic preparatio...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9825600/ https://www.ncbi.nlm.nih.gov/pubmed/36399452 http://dx.doi.org/10.1093/nar/gkac1008 |
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author | Gallo, Kathleen Kemmler, Emanuel Goede, Andrean Becker, Finnja Dunkel, Mathias Preissner, Robert Banerjee, Priyanka |
author_facet | Gallo, Kathleen Kemmler, Emanuel Goede, Andrean Becker, Finnja Dunkel, Mathias Preissner, Robert Banerjee, Priyanka |
author_sort | Gallo, Kathleen |
collection | PubMed |
description | Natural products (NPs) are single chemical compounds, substances or mixtures produced by a living organism - found in nature. Evolutionarily, NPs have been used as healing agents since thousands of years and still today continue to be the most important source of new potential therapeutic preparations. Natural products have played a key role in modern drug discovery for several diseases. Furthermore, following consumers’ increasing demand for natural food ingredients, many efforts have been made to discover natural low-calorie sweeteners in recent years. SuperNatural 3.0 is a freely available database of natural products and derivatives. The updated version contains 449 058 natural compounds along with their structural and physicochemical information. Additionally, information on pathways, mechanism of action, toxicity, vendor information if available, drug-like chemical space prediction for several diseases as antiviral, antibacterial, antimalarial, anticancer, and target specific cells like the central nervous system (CNS) are also provided for the natural compounds. The updated version of the database also provides a valuable pool of natural compounds in which potential highly sweet compounds are expected to be found. The possible taste profile of the natural compounds was predicted using our published VirtualTaste models. The SuperNatural 3.0 database is freely available via http://bioinf-applied.charite.de/supernatural_3, without any login or registration. |
format | Online Article Text |
id | pubmed-9825600 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-98256002023-01-10 SuperNatural 3.0—a database of natural products and natural product-based derivatives Gallo, Kathleen Kemmler, Emanuel Goede, Andrean Becker, Finnja Dunkel, Mathias Preissner, Robert Banerjee, Priyanka Nucleic Acids Res Database Issue Natural products (NPs) are single chemical compounds, substances or mixtures produced by a living organism - found in nature. Evolutionarily, NPs have been used as healing agents since thousands of years and still today continue to be the most important source of new potential therapeutic preparations. Natural products have played a key role in modern drug discovery for several diseases. Furthermore, following consumers’ increasing demand for natural food ingredients, many efforts have been made to discover natural low-calorie sweeteners in recent years. SuperNatural 3.0 is a freely available database of natural products and derivatives. The updated version contains 449 058 natural compounds along with their structural and physicochemical information. Additionally, information on pathways, mechanism of action, toxicity, vendor information if available, drug-like chemical space prediction for several diseases as antiviral, antibacterial, antimalarial, anticancer, and target specific cells like the central nervous system (CNS) are also provided for the natural compounds. The updated version of the database also provides a valuable pool of natural compounds in which potential highly sweet compounds are expected to be found. The possible taste profile of the natural compounds was predicted using our published VirtualTaste models. The SuperNatural 3.0 database is freely available via http://bioinf-applied.charite.de/supernatural_3, without any login or registration. Oxford University Press 2022-11-18 /pmc/articles/PMC9825600/ /pubmed/36399452 http://dx.doi.org/10.1093/nar/gkac1008 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of Nucleic Acids Research. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Database Issue Gallo, Kathleen Kemmler, Emanuel Goede, Andrean Becker, Finnja Dunkel, Mathias Preissner, Robert Banerjee, Priyanka SuperNatural 3.0—a database of natural products and natural product-based derivatives |
title | SuperNatural 3.0—a database of natural products and natural product-based derivatives |
title_full | SuperNatural 3.0—a database of natural products and natural product-based derivatives |
title_fullStr | SuperNatural 3.0—a database of natural products and natural product-based derivatives |
title_full_unstemmed | SuperNatural 3.0—a database of natural products and natural product-based derivatives |
title_short | SuperNatural 3.0—a database of natural products and natural product-based derivatives |
title_sort | supernatural 3.0—a database of natural products and natural product-based derivatives |
topic | Database Issue |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9825600/ https://www.ncbi.nlm.nih.gov/pubmed/36399452 http://dx.doi.org/10.1093/nar/gkac1008 |
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