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SuperNatural 3.0—a database of natural products and natural product-based derivatives

Natural products (NPs) are single chemical compounds, substances or mixtures produced by a living organism - found in nature. Evolutionarily, NPs have been used as healing agents since thousands of years and still today continue to be the most important source of new potential therapeutic preparatio...

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Autores principales: Gallo, Kathleen, Kemmler, Emanuel, Goede, Andrean, Becker, Finnja, Dunkel, Mathias, Preissner, Robert, Banerjee, Priyanka
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9825600/
https://www.ncbi.nlm.nih.gov/pubmed/36399452
http://dx.doi.org/10.1093/nar/gkac1008
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author Gallo, Kathleen
Kemmler, Emanuel
Goede, Andrean
Becker, Finnja
Dunkel, Mathias
Preissner, Robert
Banerjee, Priyanka
author_facet Gallo, Kathleen
Kemmler, Emanuel
Goede, Andrean
Becker, Finnja
Dunkel, Mathias
Preissner, Robert
Banerjee, Priyanka
author_sort Gallo, Kathleen
collection PubMed
description Natural products (NPs) are single chemical compounds, substances or mixtures produced by a living organism - found in nature. Evolutionarily, NPs have been used as healing agents since thousands of years and still today continue to be the most important source of new potential therapeutic preparations. Natural products have played a key role in modern drug discovery for several diseases. Furthermore, following consumers’ increasing demand for natural food ingredients, many efforts have been made to discover natural low-calorie sweeteners in recent years. SuperNatural 3.0 is a freely available database of natural products and derivatives. The updated version contains 449 058 natural compounds along with their structural and physicochemical information. Additionally, information on pathways, mechanism of action, toxicity, vendor information if available, drug-like chemical space prediction for several diseases as antiviral, antibacterial, antimalarial, anticancer, and target specific cells like the central nervous system (CNS) are also provided for the natural compounds. The updated version of the database also provides a valuable pool of natural compounds in which potential highly sweet compounds are expected to be found. The possible taste profile of the natural compounds was predicted using our published VirtualTaste models. The SuperNatural 3.0 database is freely available via http://bioinf-applied.charite.de/supernatural_3, without any login or registration.
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spelling pubmed-98256002023-01-10 SuperNatural 3.0—a database of natural products and natural product-based derivatives Gallo, Kathleen Kemmler, Emanuel Goede, Andrean Becker, Finnja Dunkel, Mathias Preissner, Robert Banerjee, Priyanka Nucleic Acids Res Database Issue Natural products (NPs) are single chemical compounds, substances or mixtures produced by a living organism - found in nature. Evolutionarily, NPs have been used as healing agents since thousands of years and still today continue to be the most important source of new potential therapeutic preparations. Natural products have played a key role in modern drug discovery for several diseases. Furthermore, following consumers’ increasing demand for natural food ingredients, many efforts have been made to discover natural low-calorie sweeteners in recent years. SuperNatural 3.0 is a freely available database of natural products and derivatives. The updated version contains 449 058 natural compounds along with their structural and physicochemical information. Additionally, information on pathways, mechanism of action, toxicity, vendor information if available, drug-like chemical space prediction for several diseases as antiviral, antibacterial, antimalarial, anticancer, and target specific cells like the central nervous system (CNS) are also provided for the natural compounds. The updated version of the database also provides a valuable pool of natural compounds in which potential highly sweet compounds are expected to be found. The possible taste profile of the natural compounds was predicted using our published VirtualTaste models. The SuperNatural 3.0 database is freely available via http://bioinf-applied.charite.de/supernatural_3, without any login or registration. Oxford University Press 2022-11-18 /pmc/articles/PMC9825600/ /pubmed/36399452 http://dx.doi.org/10.1093/nar/gkac1008 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of Nucleic Acids Research. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Database Issue
Gallo, Kathleen
Kemmler, Emanuel
Goede, Andrean
Becker, Finnja
Dunkel, Mathias
Preissner, Robert
Banerjee, Priyanka
SuperNatural 3.0—a database of natural products and natural product-based derivatives
title SuperNatural 3.0—a database of natural products and natural product-based derivatives
title_full SuperNatural 3.0—a database of natural products and natural product-based derivatives
title_fullStr SuperNatural 3.0—a database of natural products and natural product-based derivatives
title_full_unstemmed SuperNatural 3.0—a database of natural products and natural product-based derivatives
title_short SuperNatural 3.0—a database of natural products and natural product-based derivatives
title_sort supernatural 3.0—a database of natural products and natural product-based derivatives
topic Database Issue
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9825600/
https://www.ncbi.nlm.nih.gov/pubmed/36399452
http://dx.doi.org/10.1093/nar/gkac1008
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