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PDCM Finder: an open global research platform for patient-derived cancer models
PDCM Finder (www.cancermodels.org) is a cancer research platform that aggregates clinical, genomic and functional data from patient-derived xenografts, organoids and cell lines. It was launched in April 2022 as a successor of the PDX Finder portal, which focused solely on patient-derived xenograft m...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9825610/ https://www.ncbi.nlm.nih.gov/pubmed/36399494 http://dx.doi.org/10.1093/nar/gkac1021 |
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author | Perova, Zinaida Martinez, Mauricio Mandloi, Tushar Gomez, Federico Lopez Halmagyi, Csaba Follette, Alex Mason, Jeremy Newhauser, Steven Begley, Dale A Krupke, Debra M Bult, Carol Parkinson, Helen Groza, Tudor |
author_facet | Perova, Zinaida Martinez, Mauricio Mandloi, Tushar Gomez, Federico Lopez Halmagyi, Csaba Follette, Alex Mason, Jeremy Newhauser, Steven Begley, Dale A Krupke, Debra M Bult, Carol Parkinson, Helen Groza, Tudor |
author_sort | Perova, Zinaida |
collection | PubMed |
description | PDCM Finder (www.cancermodels.org) is a cancer research platform that aggregates clinical, genomic and functional data from patient-derived xenografts, organoids and cell lines. It was launched in April 2022 as a successor of the PDX Finder portal, which focused solely on patient-derived xenograft models. Currently the portal has over 6200 models across 13 cancer types, including rare paediatric models (17%) and models from minority ethnic backgrounds (33%), making it the largest free to consumer and open access resource of this kind. The PDCM Finder standardises, harmonises and integrates the complex and diverse data associated with PDCMs for the cancer community and displays over 90 million data points across a variety of data types (clinical metadata, molecular and treatment-based). PDCM data is FAIR and underpins the generation and testing of new hypotheses in cancer mechanisms and personalised medicine development. |
format | Online Article Text |
id | pubmed-9825610 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-98256102023-01-10 PDCM Finder: an open global research platform for patient-derived cancer models Perova, Zinaida Martinez, Mauricio Mandloi, Tushar Gomez, Federico Lopez Halmagyi, Csaba Follette, Alex Mason, Jeremy Newhauser, Steven Begley, Dale A Krupke, Debra M Bult, Carol Parkinson, Helen Groza, Tudor Nucleic Acids Res Database Issue PDCM Finder (www.cancermodels.org) is a cancer research platform that aggregates clinical, genomic and functional data from patient-derived xenografts, organoids and cell lines. It was launched in April 2022 as a successor of the PDX Finder portal, which focused solely on patient-derived xenograft models. Currently the portal has over 6200 models across 13 cancer types, including rare paediatric models (17%) and models from minority ethnic backgrounds (33%), making it the largest free to consumer and open access resource of this kind. The PDCM Finder standardises, harmonises and integrates the complex and diverse data associated with PDCMs for the cancer community and displays over 90 million data points across a variety of data types (clinical metadata, molecular and treatment-based). PDCM data is FAIR and underpins the generation and testing of new hypotheses in cancer mechanisms and personalised medicine development. Oxford University Press 2022-11-18 /pmc/articles/PMC9825610/ /pubmed/36399494 http://dx.doi.org/10.1093/nar/gkac1021 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of Nucleic Acids Research. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Database Issue Perova, Zinaida Martinez, Mauricio Mandloi, Tushar Gomez, Federico Lopez Halmagyi, Csaba Follette, Alex Mason, Jeremy Newhauser, Steven Begley, Dale A Krupke, Debra M Bult, Carol Parkinson, Helen Groza, Tudor PDCM Finder: an open global research platform for patient-derived cancer models |
title | PDCM Finder: an open global research platform for patient-derived cancer models |
title_full | PDCM Finder: an open global research platform for patient-derived cancer models |
title_fullStr | PDCM Finder: an open global research platform for patient-derived cancer models |
title_full_unstemmed | PDCM Finder: an open global research platform for patient-derived cancer models |
title_short | PDCM Finder: an open global research platform for patient-derived cancer models |
title_sort | pdcm finder: an open global research platform for patient-derived cancer models |
topic | Database Issue |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9825610/ https://www.ncbi.nlm.nih.gov/pubmed/36399494 http://dx.doi.org/10.1093/nar/gkac1021 |
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