Comprehensive visualization of cell–cell interactions in single-cell and spatial transcriptomics with NICHES

MOTIVATION: Recent years have seen the release of several toolsets that reveal cell–cell interactions from single-cell data. However, all existing approaches leverage mean celltype gene expression values, and do not preserve the single-cell fidelity of the original data. Here, we present NICHES (Nic...

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Detalles Bibliográficos
Autores principales: Raredon, Micha Sam Brickman, Yang, Junchen, Kothapalli, Neeharika, Lewis, Wesley, Kaminski, Naftali, Niklason, Laura E, Kluger, Yuval
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Applications Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9825783/
https://www.ncbi.nlm.nih.gov/pubmed/36458905
http://dx.doi.org/10.1093/bioinformatics/btac775

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