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Single-cell analysis of multiple cancer types reveals differences in endothelial cells between tumors and normal tissues
Endothelial cells (ECs) play an important role in tumor progression. Currently, the main target of anti-angiogenic therapy is the vascular endothelial growth factor (VEGF) pathway. Some patients do benefit from anti-VEGF/VEGFR therapy; however, a large number of patients do not have response or acqu...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Research Network of Computational and Structural Biotechnology
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9826920/ https://www.ncbi.nlm.nih.gov/pubmed/36659929 http://dx.doi.org/10.1016/j.csbj.2022.12.049 |
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author | Zhang, Jiayu Lu, Tong Lu, Shiqi Ma, Shuaijun Han, Donghui Zhang, Keying Xu, Chao Liu, Shaojie Gan, Lunbiao Wu, Xinjie Yang, Fa Wen, Weihong Qin, Weijun |
author_facet | Zhang, Jiayu Lu, Tong Lu, Shiqi Ma, Shuaijun Han, Donghui Zhang, Keying Xu, Chao Liu, Shaojie Gan, Lunbiao Wu, Xinjie Yang, Fa Wen, Weihong Qin, Weijun |
author_sort | Zhang, Jiayu |
collection | PubMed |
description | Endothelial cells (ECs) play an important role in tumor progression. Currently, the main target of anti-angiogenic therapy is the vascular endothelial growth factor (VEGF) pathway. Some patients do benefit from anti-VEGF/VEGFR therapy; however, a large number of patients do not have response or acquire drug resistance after treatment. Moreover, anti-VEGF/VEGFR therapy may lead to nephrotoxicity and cardiovascular-related side effects due to its action on normal ECs. Therefore, it is necessary to identify targets that are specific to tumor ECs and could be applied to various cancer types. We integrated single-cell RNA sequencing data from six cancer types and constructed a multi-cancer EC atlas to decode the characteristic of tumor ECs. We found that tip-like ECs mainly exist in tumor tissues but barely exist in normal tissues. Tip-like ECs are involved in the promotion of tumor angiogenesis and inhibition on anti-tumor immune responses. Moreover, tumor cells, myeloid cells, and pericytes are the main sources of pro-angiogenic factors. High proportion of tip-like ECs is associated with poor prognosis in multiple cancer types. We also identified that prostate-specific membrane antigen (PSMA) is a specific marker for tip-like ECs in all the cancer types we studied. In summary, we demonstrate that tip-like ECs are the main differential EC subcluster between tumors and normal tissues. Tip-like ECs may promote tumor progression through promoting angiogenesis while inhibiting anti-tumor immune responses. PSMA was a specific marker for tip-like ECs, which could be used as a potential target for the diagnosis and treatment of non-prostate cancers. |
format | Online Article Text |
id | pubmed-9826920 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Research Network of Computational and Structural Biotechnology |
record_format | MEDLINE/PubMed |
spelling | pubmed-98269202023-01-18 Single-cell analysis of multiple cancer types reveals differences in endothelial cells between tumors and normal tissues Zhang, Jiayu Lu, Tong Lu, Shiqi Ma, Shuaijun Han, Donghui Zhang, Keying Xu, Chao Liu, Shaojie Gan, Lunbiao Wu, Xinjie Yang, Fa Wen, Weihong Qin, Weijun Comput Struct Biotechnol J Special Issue articles from "Computational single cell omics and drug discovery" edited by Pingzhao Hu Endothelial cells (ECs) play an important role in tumor progression. Currently, the main target of anti-angiogenic therapy is the vascular endothelial growth factor (VEGF) pathway. Some patients do benefit from anti-VEGF/VEGFR therapy; however, a large number of patients do not have response or acquire drug resistance after treatment. Moreover, anti-VEGF/VEGFR therapy may lead to nephrotoxicity and cardiovascular-related side effects due to its action on normal ECs. Therefore, it is necessary to identify targets that are specific to tumor ECs and could be applied to various cancer types. We integrated single-cell RNA sequencing data from six cancer types and constructed a multi-cancer EC atlas to decode the characteristic of tumor ECs. We found that tip-like ECs mainly exist in tumor tissues but barely exist in normal tissues. Tip-like ECs are involved in the promotion of tumor angiogenesis and inhibition on anti-tumor immune responses. Moreover, tumor cells, myeloid cells, and pericytes are the main sources of pro-angiogenic factors. High proportion of tip-like ECs is associated with poor prognosis in multiple cancer types. We also identified that prostate-specific membrane antigen (PSMA) is a specific marker for tip-like ECs in all the cancer types we studied. In summary, we demonstrate that tip-like ECs are the main differential EC subcluster between tumors and normal tissues. Tip-like ECs may promote tumor progression through promoting angiogenesis while inhibiting anti-tumor immune responses. PSMA was a specific marker for tip-like ECs, which could be used as a potential target for the diagnosis and treatment of non-prostate cancers. Research Network of Computational and Structural Biotechnology 2022-12-30 /pmc/articles/PMC9826920/ /pubmed/36659929 http://dx.doi.org/10.1016/j.csbj.2022.12.049 Text en © 2022 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Special Issue articles from "Computational single cell omics and drug discovery" edited by Pingzhao Hu Zhang, Jiayu Lu, Tong Lu, Shiqi Ma, Shuaijun Han, Donghui Zhang, Keying Xu, Chao Liu, Shaojie Gan, Lunbiao Wu, Xinjie Yang, Fa Wen, Weihong Qin, Weijun Single-cell analysis of multiple cancer types reveals differences in endothelial cells between tumors and normal tissues |
title | Single-cell analysis of multiple cancer types reveals differences in endothelial cells between tumors and normal tissues |
title_full | Single-cell analysis of multiple cancer types reveals differences in endothelial cells between tumors and normal tissues |
title_fullStr | Single-cell analysis of multiple cancer types reveals differences in endothelial cells between tumors and normal tissues |
title_full_unstemmed | Single-cell analysis of multiple cancer types reveals differences in endothelial cells between tumors and normal tissues |
title_short | Single-cell analysis of multiple cancer types reveals differences in endothelial cells between tumors and normal tissues |
title_sort | single-cell analysis of multiple cancer types reveals differences in endothelial cells between tumors and normal tissues |
topic | Special Issue articles from "Computational single cell omics and drug discovery" edited by Pingzhao Hu |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9826920/ https://www.ncbi.nlm.nih.gov/pubmed/36659929 http://dx.doi.org/10.1016/j.csbj.2022.12.049 |
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