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Single-cell analysis of multiple cancer types reveals differences in endothelial cells between tumors and normal tissues

Endothelial cells (ECs) play an important role in tumor progression. Currently, the main target of anti-angiogenic therapy is the vascular endothelial growth factor (VEGF) pathway. Some patients do benefit from anti-VEGF/VEGFR therapy; however, a large number of patients do not have response or acqu...

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Autores principales: Zhang, Jiayu, Lu, Tong, Lu, Shiqi, Ma, Shuaijun, Han, Donghui, Zhang, Keying, Xu, Chao, Liu, Shaojie, Gan, Lunbiao, Wu, Xinjie, Yang, Fa, Wen, Weihong, Qin, Weijun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Research Network of Computational and Structural Biotechnology 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9826920/
https://www.ncbi.nlm.nih.gov/pubmed/36659929
http://dx.doi.org/10.1016/j.csbj.2022.12.049
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author Zhang, Jiayu
Lu, Tong
Lu, Shiqi
Ma, Shuaijun
Han, Donghui
Zhang, Keying
Xu, Chao
Liu, Shaojie
Gan, Lunbiao
Wu, Xinjie
Yang, Fa
Wen, Weihong
Qin, Weijun
author_facet Zhang, Jiayu
Lu, Tong
Lu, Shiqi
Ma, Shuaijun
Han, Donghui
Zhang, Keying
Xu, Chao
Liu, Shaojie
Gan, Lunbiao
Wu, Xinjie
Yang, Fa
Wen, Weihong
Qin, Weijun
author_sort Zhang, Jiayu
collection PubMed
description Endothelial cells (ECs) play an important role in tumor progression. Currently, the main target of anti-angiogenic therapy is the vascular endothelial growth factor (VEGF) pathway. Some patients do benefit from anti-VEGF/VEGFR therapy; however, a large number of patients do not have response or acquire drug resistance after treatment. Moreover, anti-VEGF/VEGFR therapy may lead to nephrotoxicity and cardiovascular-related side effects due to its action on normal ECs. Therefore, it is necessary to identify targets that are specific to tumor ECs and could be applied to various cancer types. We integrated single-cell RNA sequencing data from six cancer types and constructed a multi-cancer EC atlas to decode the characteristic of tumor ECs. We found that tip-like ECs mainly exist in tumor tissues but barely exist in normal tissues. Tip-like ECs are involved in the promotion of tumor angiogenesis and inhibition on anti-tumor immune responses. Moreover, tumor cells, myeloid cells, and pericytes are the main sources of pro-angiogenic factors. High proportion of tip-like ECs is associated with poor prognosis in multiple cancer types. We also identified that prostate-specific membrane antigen (PSMA) is a specific marker for tip-like ECs in all the cancer types we studied. In summary, we demonstrate that tip-like ECs are the main differential EC subcluster between tumors and normal tissues. Tip-like ECs may promote tumor progression through promoting angiogenesis while inhibiting anti-tumor immune responses. PSMA was a specific marker for tip-like ECs, which could be used as a potential target for the diagnosis and treatment of non-prostate cancers.
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spelling pubmed-98269202023-01-18 Single-cell analysis of multiple cancer types reveals differences in endothelial cells between tumors and normal tissues Zhang, Jiayu Lu, Tong Lu, Shiqi Ma, Shuaijun Han, Donghui Zhang, Keying Xu, Chao Liu, Shaojie Gan, Lunbiao Wu, Xinjie Yang, Fa Wen, Weihong Qin, Weijun Comput Struct Biotechnol J Special Issue articles from "Computational single cell omics and drug discovery" edited by Pingzhao Hu Endothelial cells (ECs) play an important role in tumor progression. Currently, the main target of anti-angiogenic therapy is the vascular endothelial growth factor (VEGF) pathway. Some patients do benefit from anti-VEGF/VEGFR therapy; however, a large number of patients do not have response or acquire drug resistance after treatment. Moreover, anti-VEGF/VEGFR therapy may lead to nephrotoxicity and cardiovascular-related side effects due to its action on normal ECs. Therefore, it is necessary to identify targets that are specific to tumor ECs and could be applied to various cancer types. We integrated single-cell RNA sequencing data from six cancer types and constructed a multi-cancer EC atlas to decode the characteristic of tumor ECs. We found that tip-like ECs mainly exist in tumor tissues but barely exist in normal tissues. Tip-like ECs are involved in the promotion of tumor angiogenesis and inhibition on anti-tumor immune responses. Moreover, tumor cells, myeloid cells, and pericytes are the main sources of pro-angiogenic factors. High proportion of tip-like ECs is associated with poor prognosis in multiple cancer types. We also identified that prostate-specific membrane antigen (PSMA) is a specific marker for tip-like ECs in all the cancer types we studied. In summary, we demonstrate that tip-like ECs are the main differential EC subcluster between tumors and normal tissues. Tip-like ECs may promote tumor progression through promoting angiogenesis while inhibiting anti-tumor immune responses. PSMA was a specific marker for tip-like ECs, which could be used as a potential target for the diagnosis and treatment of non-prostate cancers. Research Network of Computational and Structural Biotechnology 2022-12-30 /pmc/articles/PMC9826920/ /pubmed/36659929 http://dx.doi.org/10.1016/j.csbj.2022.12.049 Text en © 2022 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Special Issue articles from "Computational single cell omics and drug discovery" edited by Pingzhao Hu
Zhang, Jiayu
Lu, Tong
Lu, Shiqi
Ma, Shuaijun
Han, Donghui
Zhang, Keying
Xu, Chao
Liu, Shaojie
Gan, Lunbiao
Wu, Xinjie
Yang, Fa
Wen, Weihong
Qin, Weijun
Single-cell analysis of multiple cancer types reveals differences in endothelial cells between tumors and normal tissues
title Single-cell analysis of multiple cancer types reveals differences in endothelial cells between tumors and normal tissues
title_full Single-cell analysis of multiple cancer types reveals differences in endothelial cells between tumors and normal tissues
title_fullStr Single-cell analysis of multiple cancer types reveals differences in endothelial cells between tumors and normal tissues
title_full_unstemmed Single-cell analysis of multiple cancer types reveals differences in endothelial cells between tumors and normal tissues
title_short Single-cell analysis of multiple cancer types reveals differences in endothelial cells between tumors and normal tissues
title_sort single-cell analysis of multiple cancer types reveals differences in endothelial cells between tumors and normal tissues
topic Special Issue articles from "Computational single cell omics and drug discovery" edited by Pingzhao Hu
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9826920/
https://www.ncbi.nlm.nih.gov/pubmed/36659929
http://dx.doi.org/10.1016/j.csbj.2022.12.049
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