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BLOod Test Trend for cancEr Detection (BLOTTED): protocol for an observational and prediction model development study using English primary care electronic health record data
BACKGROUND: Simple blood tests can play an important role in identifying patients for cancer investigation. The current evidence base is limited almost entirely to tests used in isolation. However, recent evidence suggests combining multiple types of blood tests and investigating trends in blood tes...
Autores principales: | , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9830700/ https://www.ncbi.nlm.nih.gov/pubmed/36624489 http://dx.doi.org/10.1186/s41512-022-00138-6 |
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author | Virdee, Pradeep S. Bankhead, Clare Koshiaris, Constantinos Drakesmith, Cynthia Wright Oke, Jason Withrow, Diana Swain, Subhashisa Collins, Kiana Chammas, Lara Tamm, Andres Zhu, Tingting Morris, Eva Holt, Tim Birks, Jacqueline Perera, Rafael Hobbs, F. D. Richard Nicholson, Brian D. |
author_facet | Virdee, Pradeep S. Bankhead, Clare Koshiaris, Constantinos Drakesmith, Cynthia Wright Oke, Jason Withrow, Diana Swain, Subhashisa Collins, Kiana Chammas, Lara Tamm, Andres Zhu, Tingting Morris, Eva Holt, Tim Birks, Jacqueline Perera, Rafael Hobbs, F. D. Richard Nicholson, Brian D. |
author_sort | Virdee, Pradeep S. |
collection | PubMed |
description | BACKGROUND: Simple blood tests can play an important role in identifying patients for cancer investigation. The current evidence base is limited almost entirely to tests used in isolation. However, recent evidence suggests combining multiple types of blood tests and investigating trends in blood test results over time could be more useful to select patients for further cancer investigation. Such trends could increase cancer yield and reduce unnecessary referrals. We aim to explore whether trends in blood test results are more useful than symptoms or single blood test results in selecting primary care patients for cancer investigation. We aim to develop clinical prediction models that incorporate trends in blood tests to identify the risk of cancer. METHODS: Primary care electronic health record data from the English Clinical Practice Research Datalink Aurum primary care database will be accessed and linked to cancer registrations and secondary care datasets. Using a cohort study design, we will describe patterns in blood testing (aim 1) and explore associations between covariates and trends in blood tests with cancer using mixed-effects, Cox, and dynamic models (aim 2). To build the predictive models for the risk of cancer, we will use dynamic risk modelling (such as multivariate joint modelling) and machine learning, incorporating simultaneous trends in multiple blood tests, together with other covariates (aim 3). Model performance will be assessed using various performance measures, including c-statistic and calibration plots. DISCUSSION: These models will form decision rules to help general practitioners find patients who need a referral for further investigation of cancer. This could increase cancer yield, reduce unnecessary referrals, and give more patients the opportunity for treatment and improved outcomes. |
format | Online Article Text |
id | pubmed-9830700 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-98307002023-01-11 BLOod Test Trend for cancEr Detection (BLOTTED): protocol for an observational and prediction model development study using English primary care electronic health record data Virdee, Pradeep S. Bankhead, Clare Koshiaris, Constantinos Drakesmith, Cynthia Wright Oke, Jason Withrow, Diana Swain, Subhashisa Collins, Kiana Chammas, Lara Tamm, Andres Zhu, Tingting Morris, Eva Holt, Tim Birks, Jacqueline Perera, Rafael Hobbs, F. D. Richard Nicholson, Brian D. Diagn Progn Res Protocol BACKGROUND: Simple blood tests can play an important role in identifying patients for cancer investigation. The current evidence base is limited almost entirely to tests used in isolation. However, recent evidence suggests combining multiple types of blood tests and investigating trends in blood test results over time could be more useful to select patients for further cancer investigation. Such trends could increase cancer yield and reduce unnecessary referrals. We aim to explore whether trends in blood test results are more useful than symptoms or single blood test results in selecting primary care patients for cancer investigation. We aim to develop clinical prediction models that incorporate trends in blood tests to identify the risk of cancer. METHODS: Primary care electronic health record data from the English Clinical Practice Research Datalink Aurum primary care database will be accessed and linked to cancer registrations and secondary care datasets. Using a cohort study design, we will describe patterns in blood testing (aim 1) and explore associations between covariates and trends in blood tests with cancer using mixed-effects, Cox, and dynamic models (aim 2). To build the predictive models for the risk of cancer, we will use dynamic risk modelling (such as multivariate joint modelling) and machine learning, incorporating simultaneous trends in multiple blood tests, together with other covariates (aim 3). Model performance will be assessed using various performance measures, including c-statistic and calibration plots. DISCUSSION: These models will form decision rules to help general practitioners find patients who need a referral for further investigation of cancer. This could increase cancer yield, reduce unnecessary referrals, and give more patients the opportunity for treatment and improved outcomes. BioMed Central 2023-01-10 /pmc/articles/PMC9830700/ /pubmed/36624489 http://dx.doi.org/10.1186/s41512-022-00138-6 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Protocol Virdee, Pradeep S. Bankhead, Clare Koshiaris, Constantinos Drakesmith, Cynthia Wright Oke, Jason Withrow, Diana Swain, Subhashisa Collins, Kiana Chammas, Lara Tamm, Andres Zhu, Tingting Morris, Eva Holt, Tim Birks, Jacqueline Perera, Rafael Hobbs, F. D. Richard Nicholson, Brian D. BLOod Test Trend for cancEr Detection (BLOTTED): protocol for an observational and prediction model development study using English primary care electronic health record data |
title | BLOod Test Trend for cancEr Detection (BLOTTED): protocol for an observational and prediction model development study using English primary care electronic health record data |
title_full | BLOod Test Trend for cancEr Detection (BLOTTED): protocol for an observational and prediction model development study using English primary care electronic health record data |
title_fullStr | BLOod Test Trend for cancEr Detection (BLOTTED): protocol for an observational and prediction model development study using English primary care electronic health record data |
title_full_unstemmed | BLOod Test Trend for cancEr Detection (BLOTTED): protocol for an observational and prediction model development study using English primary care electronic health record data |
title_short | BLOod Test Trend for cancEr Detection (BLOTTED): protocol for an observational and prediction model development study using English primary care electronic health record data |
title_sort | blood test trend for cancer detection (blotted): protocol for an observational and prediction model development study using english primary care electronic health record data |
topic | Protocol |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9830700/ https://www.ncbi.nlm.nih.gov/pubmed/36624489 http://dx.doi.org/10.1186/s41512-022-00138-6 |
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