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Statistical Properties of a Virtual Cohort for In Silico Trials Generated with a Statistical Anatomy Atlas
Osteoporosis-related hip fragility fractures are a catastrophic event for patient lives but are not frequently observed in prospective studies, and therefore phase III clinical trials using fractures as primary clinical endpoint require thousands of patients enrolled for several years to reach stati...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9832093/ https://www.ncbi.nlm.nih.gov/pubmed/36066781 http://dx.doi.org/10.1007/s10439-022-03050-8 |
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author | La Mattina, Antonino A. Baruffaldi, Fabio Taylor, Mark Viceconti, Marco |
author_facet | La Mattina, Antonino A. Baruffaldi, Fabio Taylor, Mark Viceconti, Marco |
author_sort | La Mattina, Antonino A. |
collection | PubMed |
description | Osteoporosis-related hip fragility fractures are a catastrophic event for patient lives but are not frequently observed in prospective studies, and therefore phase III clinical trials using fractures as primary clinical endpoint require thousands of patients enrolled for several years to reach statistical significance. A novel answer to the large number of subjects needed to reach the desired evidence level is offered by In Silico Trials, that is, the simulation of a clinical trial on a large cohort of virtual patients, monitoring the biomarkers of interest. In this work we investigated if statistical aliasing from a custom anatomy atlas could be used to expand the patient cohort while retaining the original biomechanical characteristics. We used a pair-matched cohort of 94 post-menopausal women (at the time of the CT scan, 47 fractured and 47 not fractured) to create a statistical anatomy atlas through principal component analysis, and up-sampled the atlas in order to obtain over 1000 synthetic patient models. We applied the biomechanical computed tomography pipeline to the resulting virtual cohort and compared its fracture risk distribution with that of the original physical cohort. While the distribution of femoral strength values in the non-fractured sub-group was nearly identical to that of the original physical cohort, that of the fractured sub-group was lower than in the physical cohort. Nonetheless, by using the classification threshold used for the original population, the synthetic population was still divided into two parts of approximatively equal number. |
format | Online Article Text |
id | pubmed-9832093 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-98320932023-01-12 Statistical Properties of a Virtual Cohort for In Silico Trials Generated with a Statistical Anatomy Atlas La Mattina, Antonino A. Baruffaldi, Fabio Taylor, Mark Viceconti, Marco Ann Biomed Eng S.I. : Modeling for Advancing Regulatory Science Osteoporosis-related hip fragility fractures are a catastrophic event for patient lives but are not frequently observed in prospective studies, and therefore phase III clinical trials using fractures as primary clinical endpoint require thousands of patients enrolled for several years to reach statistical significance. A novel answer to the large number of subjects needed to reach the desired evidence level is offered by In Silico Trials, that is, the simulation of a clinical trial on a large cohort of virtual patients, monitoring the biomarkers of interest. In this work we investigated if statistical aliasing from a custom anatomy atlas could be used to expand the patient cohort while retaining the original biomechanical characteristics. We used a pair-matched cohort of 94 post-menopausal women (at the time of the CT scan, 47 fractured and 47 not fractured) to create a statistical anatomy atlas through principal component analysis, and up-sampled the atlas in order to obtain over 1000 synthetic patient models. We applied the biomechanical computed tomography pipeline to the resulting virtual cohort and compared its fracture risk distribution with that of the original physical cohort. While the distribution of femoral strength values in the non-fractured sub-group was nearly identical to that of the original physical cohort, that of the fractured sub-group was lower than in the physical cohort. Nonetheless, by using the classification threshold used for the original population, the synthetic population was still divided into two parts of approximatively equal number. Springer International Publishing 2022-09-06 2023 /pmc/articles/PMC9832093/ /pubmed/36066781 http://dx.doi.org/10.1007/s10439-022-03050-8 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | S.I. : Modeling for Advancing Regulatory Science La Mattina, Antonino A. Baruffaldi, Fabio Taylor, Mark Viceconti, Marco Statistical Properties of a Virtual Cohort for In Silico Trials Generated with a Statistical Anatomy Atlas |
title | Statistical Properties of a Virtual Cohort for In Silico Trials Generated with a Statistical Anatomy Atlas |
title_full | Statistical Properties of a Virtual Cohort for In Silico Trials Generated with a Statistical Anatomy Atlas |
title_fullStr | Statistical Properties of a Virtual Cohort for In Silico Trials Generated with a Statistical Anatomy Atlas |
title_full_unstemmed | Statistical Properties of a Virtual Cohort for In Silico Trials Generated with a Statistical Anatomy Atlas |
title_short | Statistical Properties of a Virtual Cohort for In Silico Trials Generated with a Statistical Anatomy Atlas |
title_sort | statistical properties of a virtual cohort for in silico trials generated with a statistical anatomy atlas |
topic | S.I. : Modeling for Advancing Regulatory Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9832093/ https://www.ncbi.nlm.nih.gov/pubmed/36066781 http://dx.doi.org/10.1007/s10439-022-03050-8 |
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