The complete chloroplast genome sequence of Camellia sinensis var. sinensis cultivar ‘FuDingDaBaiCha’

The complete chloroplast (cp) genome sequence of Camellia sinensis var. sinensis cultivar ‘FuDingDaBaiCha’ (FD), one of the key contributors to the history of tea breeding in China, was determined in this study. The cp genome of FD is 157,025 bp in length, including a large single-copy (LSC, 86,586 ...

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Autores principales: Qiao, Dahe, Yang, Chun, Guo, Yan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2023
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9833401/
https://www.ncbi.nlm.nih.gov/pubmed/36643810
http://dx.doi.org/10.1080/23802359.2022.2161327
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author Qiao, Dahe
Yang, Chun
Guo, Yan
author_facet Qiao, Dahe
Yang, Chun
Guo, Yan
author_sort Qiao, Dahe
collection PubMed
description The complete chloroplast (cp) genome sequence of Camellia sinensis var. sinensis cultivar ‘FuDingDaBaiCha’ (FD), one of the key contributors to the history of tea breeding in China, was determined in this study. The cp genome of FD is 157,025 bp in length, including a large single-copy (LSC, 86,586 bp), a small single-copy (SSC, 18,277 bp), and a pair of inverted repeats (IRa and IRb, 26,081 bp). The overall GC content is 37.3%. A total of 137 genes were predicted, including 92 protein-coding genes, 37 tRNA genes, and eight rRNA genes. Phylogenetic analysis showed that FD was closely related to C. sinensis cv. ‘AnHua’, C. sinensis cv. ‘QianCha 1’, and C. sinensis cv. ‘BanTianYao’. The determination of the complete cp genome sequence of FD provides a way for the subsequent study of the genetic background and phylogenetic relationships of different tea plant cultivars.
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spelling pubmed-98334012023-01-12 The complete chloroplast genome sequence of Camellia sinensis var. sinensis cultivar ‘FuDingDaBaiCha’ Qiao, Dahe Yang, Chun Guo, Yan Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast (cp) genome sequence of Camellia sinensis var. sinensis cultivar ‘FuDingDaBaiCha’ (FD), one of the key contributors to the history of tea breeding in China, was determined in this study. The cp genome of FD is 157,025 bp in length, including a large single-copy (LSC, 86,586 bp), a small single-copy (SSC, 18,277 bp), and a pair of inverted repeats (IRa and IRb, 26,081 bp). The overall GC content is 37.3%. A total of 137 genes were predicted, including 92 protein-coding genes, 37 tRNA genes, and eight rRNA genes. Phylogenetic analysis showed that FD was closely related to C. sinensis cv. ‘AnHua’, C. sinensis cv. ‘QianCha 1’, and C. sinensis cv. ‘BanTianYao’. The determination of the complete cp genome sequence of FD provides a way for the subsequent study of the genetic background and phylogenetic relationships of different tea plant cultivars. Taylor & Francis 2023-01-08 /pmc/articles/PMC9833401/ /pubmed/36643810 http://dx.doi.org/10.1080/23802359.2022.2161327 Text en © 2023 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Qiao, Dahe
Yang, Chun
Guo, Yan
The complete chloroplast genome sequence of Camellia sinensis var. sinensis cultivar ‘FuDingDaBaiCha’
title The complete chloroplast genome sequence of Camellia sinensis var. sinensis cultivar ‘FuDingDaBaiCha’
title_full The complete chloroplast genome sequence of Camellia sinensis var. sinensis cultivar ‘FuDingDaBaiCha’
title_fullStr The complete chloroplast genome sequence of Camellia sinensis var. sinensis cultivar ‘FuDingDaBaiCha’
title_full_unstemmed The complete chloroplast genome sequence of Camellia sinensis var. sinensis cultivar ‘FuDingDaBaiCha’
title_short The complete chloroplast genome sequence of Camellia sinensis var. sinensis cultivar ‘FuDingDaBaiCha’
title_sort complete chloroplast genome sequence of camellia sinensis var. sinensis cultivar ‘fudingdabaicha’
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9833401/
https://www.ncbi.nlm.nih.gov/pubmed/36643810
http://dx.doi.org/10.1080/23802359.2022.2161327
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