Surveillance of rhinovirus diversity among a university community identifies multiple types from all three species including an unassigned rhinovirus A genotype

We determine the presence and diversity of rhinoviruses in nasopharyngeal swab samples from 248 individuals who presented with influenza‐like illness (ILI) at a university clinic in the Southwest United States between October 1, 2020 and March 31, 2021. We identify at least 13 rhinovirus genotypes (...

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Autores principales: Faleye, Temitope O. C., Elyaderani, Amir, Skidmore, Peter, Adhikari, Sangeet, Smith, Abriana, Kaiser, Nicole, Sandrolini, Helen, Finnerty, Sarah, Halden, Rolf U., Varsani, Arvind, Scotch, Matthew
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Short Communications
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9835438/
https://www.ncbi.nlm.nih.gov/pubmed/36168937
http://dx.doi.org/10.1111/irv.13057
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author Faleye, Temitope O. C.
Elyaderani, Amir
Skidmore, Peter
Adhikari, Sangeet
Smith, Abriana
Kaiser, Nicole
Sandrolini, Helen
Finnerty, Sarah
Halden, Rolf U.
Varsani, Arvind
Scotch, Matthew
author_facet Faleye, Temitope O. C.
Elyaderani, Amir
Skidmore, Peter
Adhikari, Sangeet
Smith, Abriana
Kaiser, Nicole
Sandrolini, Helen
Finnerty, Sarah
Halden, Rolf U.
Varsani, Arvind
Scotch, Matthew
author_sort Faleye, Temitope O. C.
collection PubMed
description We determine the presence and diversity of rhinoviruses in nasopharyngeal swab samples from 248 individuals who presented with influenza‐like illness (ILI) at a university clinic in the Southwest United States between October 1, 2020 and March 31, 2021. We identify at least 13 rhinovirus genotypes (A11, A22, A23, A25, A67, A101, B6, B79, C1, C17, C36, and C56, as well a new genotype [AZ88**]) and 16 variants that contributed to the burden of ILI in the community. We also describe the complete capsid protein gene of a member (AZ88**) of an unassigned rhinovirus A genotype.
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spelling pubmed-98354382023-01-17 Surveillance of rhinovirus diversity among a university community identifies multiple types from all three species including an unassigned rhinovirus A genotype Faleye, Temitope O. C. Elyaderani, Amir Skidmore, Peter Adhikari, Sangeet Smith, Abriana Kaiser, Nicole Sandrolini, Helen Finnerty, Sarah Halden, Rolf U. Varsani, Arvind Scotch, Matthew Influenza Other Respir Viruses Short Communications We determine the presence and diversity of rhinoviruses in nasopharyngeal swab samples from 248 individuals who presented with influenza‐like illness (ILI) at a university clinic in the Southwest United States between October 1, 2020 and March 31, 2021. We identify at least 13 rhinovirus genotypes (A11, A22, A23, A25, A67, A101, B6, B79, C1, C17, C36, and C56, as well a new genotype [AZ88**]) and 16 variants that contributed to the burden of ILI in the community. We also describe the complete capsid protein gene of a member (AZ88**) of an unassigned rhinovirus A genotype. John Wiley and Sons Inc. 2022-09-28 /pmc/articles/PMC9835438/ /pubmed/36168937 http://dx.doi.org/10.1111/irv.13057 Text en © 2022 The Authors. Influenza and Other Respiratory Viruses published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Communications
Faleye, Temitope O. C.
Elyaderani, Amir
Skidmore, Peter
Adhikari, Sangeet
Smith, Abriana
Kaiser, Nicole
Sandrolini, Helen
Finnerty, Sarah
Halden, Rolf U.
Varsani, Arvind
Scotch, Matthew
Surveillance of rhinovirus diversity among a university community identifies multiple types from all three species including an unassigned rhinovirus A genotype
title Surveillance of rhinovirus diversity among a university community identifies multiple types from all three species including an unassigned rhinovirus A genotype
title_full Surveillance of rhinovirus diversity among a university community identifies multiple types from all three species including an unassigned rhinovirus A genotype
title_fullStr Surveillance of rhinovirus diversity among a university community identifies multiple types from all three species including an unassigned rhinovirus A genotype
title_full_unstemmed Surveillance of rhinovirus diversity among a university community identifies multiple types from all three species including an unassigned rhinovirus A genotype
title_short Surveillance of rhinovirus diversity among a university community identifies multiple types from all three species including an unassigned rhinovirus A genotype
title_sort surveillance of rhinovirus diversity among a university community identifies multiple types from all three species including an unassigned rhinovirus a genotype
topic Short Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9835438/
https://www.ncbi.nlm.nih.gov/pubmed/36168937
http://dx.doi.org/10.1111/irv.13057
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