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Novel, User-Friendly Experimental and Analysis Strategies for Fast Voltammetry: 1. The Analysis Kid for FSCV
[Image: see text] Fast-scan cyclic voltammetry (FSCV) at carbon fiber microelectrodes measures low concentrations of analytes in biological systems. There are ongoing efforts to simplify FSCV analysis, and several custom platforms are available for filtering and multimodal analysis of FSCV signals,...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical
Society
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9836074/ https://www.ncbi.nlm.nih.gov/pubmed/36785731 http://dx.doi.org/10.1021/acsmeasuresciau.1c00003 |
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author | Mena, Sergio Dietsch, Solene Berger, Shane N. Witt, Colby E. Hashemi, Parastoo |
author_facet | Mena, Sergio Dietsch, Solene Berger, Shane N. Witt, Colby E. Hashemi, Parastoo |
author_sort | Mena, Sergio |
collection | PubMed |
description | [Image: see text] Fast-scan cyclic voltammetry (FSCV) at carbon fiber microelectrodes measures low concentrations of analytes in biological systems. There are ongoing efforts to simplify FSCV analysis, and several custom platforms are available for filtering and multimodal analysis of FSCV signals, but there is no single, easily accessible platform that has the capacity for all of these features. Here we present The Analysis Kid: currently, the only free, open-source cloud application that does not require a specialized runtime environment and is easily accessible via common browsers. We show that a user-friendly interface can analyze multiplatform file formats to provide multimodal visualization of FSCV color plots with digital background subtraction. We highlight key features that allow interactive calibration and semiautomatic parametric analysis via peak finding algorithms to automatically detect the maximum amplitude, area under the curve, and clearance rate of the signal. Finally, The Analysis Kid enables semiautomatic fitting of data with Michaelis–Menten kinetics with single or dual reuptake models. The Analysis Kid can be freely accessed at http://analysis-kid.hashemilab.com/. The web application code is found, under an MIT license, at https://github.com/sermeor/The-Analysis-Kid. |
format | Online Article Text |
id | pubmed-9836074 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | American Chemical
Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-98360742023-02-10 Novel, User-Friendly Experimental and Analysis Strategies for Fast Voltammetry: 1. The Analysis Kid for FSCV Mena, Sergio Dietsch, Solene Berger, Shane N. Witt, Colby E. Hashemi, Parastoo ACS Meas Sci Au [Image: see text] Fast-scan cyclic voltammetry (FSCV) at carbon fiber microelectrodes measures low concentrations of analytes in biological systems. There are ongoing efforts to simplify FSCV analysis, and several custom platforms are available for filtering and multimodal analysis of FSCV signals, but there is no single, easily accessible platform that has the capacity for all of these features. Here we present The Analysis Kid: currently, the only free, open-source cloud application that does not require a specialized runtime environment and is easily accessible via common browsers. We show that a user-friendly interface can analyze multiplatform file formats to provide multimodal visualization of FSCV color plots with digital background subtraction. We highlight key features that allow interactive calibration and semiautomatic parametric analysis via peak finding algorithms to automatically detect the maximum amplitude, area under the curve, and clearance rate of the signal. Finally, The Analysis Kid enables semiautomatic fitting of data with Michaelis–Menten kinetics with single or dual reuptake models. The Analysis Kid can be freely accessed at http://analysis-kid.hashemilab.com/. The web application code is found, under an MIT license, at https://github.com/sermeor/The-Analysis-Kid. American Chemical Society 2021-06-29 /pmc/articles/PMC9836074/ /pubmed/36785731 http://dx.doi.org/10.1021/acsmeasuresciau.1c00003 Text en © 2021 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by-nc-nd/4.0/Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Mena, Sergio Dietsch, Solene Berger, Shane N. Witt, Colby E. Hashemi, Parastoo Novel, User-Friendly Experimental and Analysis Strategies for Fast Voltammetry: 1. The Analysis Kid for FSCV |
title | Novel, User-Friendly Experimental and Analysis Strategies
for Fast Voltammetry: 1. The Analysis Kid for FSCV |
title_full | Novel, User-Friendly Experimental and Analysis Strategies
for Fast Voltammetry: 1. The Analysis Kid for FSCV |
title_fullStr | Novel, User-Friendly Experimental and Analysis Strategies
for Fast Voltammetry: 1. The Analysis Kid for FSCV |
title_full_unstemmed | Novel, User-Friendly Experimental and Analysis Strategies
for Fast Voltammetry: 1. The Analysis Kid for FSCV |
title_short | Novel, User-Friendly Experimental and Analysis Strategies
for Fast Voltammetry: 1. The Analysis Kid for FSCV |
title_sort | novel, user-friendly experimental and analysis strategies
for fast voltammetry: 1. the analysis kid for fscv |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9836074/ https://www.ncbi.nlm.nih.gov/pubmed/36785731 http://dx.doi.org/10.1021/acsmeasuresciau.1c00003 |
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