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Application of convolutional neural network for analyzing hepatic fibrosis in mice

Recently, with the development of computer vision using artificial intelligence (AI), clinical research on diagnosis and prediction using medical image data has increased. In this study, we applied AI methods to analyze hepatic fibrosis in mice to determine whether an AI algorithm can be used to ana...

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Autores principales: Kim, Hyun-Ji, Baek, Eun Bok, Hwang, Ji-Hee, Lim, Minyoung, Jung, Won Hoon, Bae, Myung Ae, Son, Hwa-Young, Cho, Jae-Woo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Japanese Society of Toxicologic Pathology 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9837472/
https://www.ncbi.nlm.nih.gov/pubmed/36683726
http://dx.doi.org/10.1293/tox.2022-0066
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author Kim, Hyun-Ji
Baek, Eun Bok
Hwang, Ji-Hee
Lim, Minyoung
Jung, Won Hoon
Bae, Myung Ae
Son, Hwa-Young
Cho, Jae-Woo
author_facet Kim, Hyun-Ji
Baek, Eun Bok
Hwang, Ji-Hee
Lim, Minyoung
Jung, Won Hoon
Bae, Myung Ae
Son, Hwa-Young
Cho, Jae-Woo
author_sort Kim, Hyun-Ji
collection PubMed
description Recently, with the development of computer vision using artificial intelligence (AI), clinical research on diagnosis and prediction using medical image data has increased. In this study, we applied AI methods to analyze hepatic fibrosis in mice to determine whether an AI algorithm can be used to analyze lesions. Whole slide image (WSI) Sirius Red staining was used to examine hepatic fibrosis. The Xception network, an AI algorithm, was used to train normal and fibrotic lesion identification. We compared the results from two analyses, that is, pathologists’ grades and researchers’ annotations, to observe whether the automated algorithm can support toxicological pathologists efficiently as a new apparatus. The accuracies of the trained model computed from the training and validation datasets were greater than 99%, and that obtained by testing the model was 100%. In the comparison between analyses, all analyses showed significant differences in the results for each group. Furthermore, both normalized fibrosis grades inferred from the trained model annotated the fibrosis area, and the grades assigned by the pathologists showed significant correlations. Notably, the deep learning algorithm derived the highest correlation with the pathologists’ average grade. Owing to the correlation outcomes, we conclude that the trained model might produce results comparable to those of the pathologists’ grading of the Sirius Red-stained WSI fibrosis. This study illustrates that the deep learning algorithm can potentially be used for analyzing fibrotic lesions in combination with Sirius Red-stained WSIs as a second opinion tool in non-clinical research.
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spelling pubmed-98374722023-01-20 Application of convolutional neural network for analyzing hepatic fibrosis in mice Kim, Hyun-Ji Baek, Eun Bok Hwang, Ji-Hee Lim, Minyoung Jung, Won Hoon Bae, Myung Ae Son, Hwa-Young Cho, Jae-Woo J Toxicol Pathol Original Article Recently, with the development of computer vision using artificial intelligence (AI), clinical research on diagnosis and prediction using medical image data has increased. In this study, we applied AI methods to analyze hepatic fibrosis in mice to determine whether an AI algorithm can be used to analyze lesions. Whole slide image (WSI) Sirius Red staining was used to examine hepatic fibrosis. The Xception network, an AI algorithm, was used to train normal and fibrotic lesion identification. We compared the results from two analyses, that is, pathologists’ grades and researchers’ annotations, to observe whether the automated algorithm can support toxicological pathologists efficiently as a new apparatus. The accuracies of the trained model computed from the training and validation datasets were greater than 99%, and that obtained by testing the model was 100%. In the comparison between analyses, all analyses showed significant differences in the results for each group. Furthermore, both normalized fibrosis grades inferred from the trained model annotated the fibrosis area, and the grades assigned by the pathologists showed significant correlations. Notably, the deep learning algorithm derived the highest correlation with the pathologists’ average grade. Owing to the correlation outcomes, we conclude that the trained model might produce results comparable to those of the pathologists’ grading of the Sirius Red-stained WSI fibrosis. This study illustrates that the deep learning algorithm can potentially be used for analyzing fibrotic lesions in combination with Sirius Red-stained WSIs as a second opinion tool in non-clinical research. Japanese Society of Toxicologic Pathology 2022-10-13 2023-01 /pmc/articles/PMC9837472/ /pubmed/36683726 http://dx.doi.org/10.1293/tox.2022-0066 Text en ©2023 The Japanese Society of Toxicologic Pathology https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution Non-Commercial No Derivatives (by-nc-nd) License. (CC-BY-NC-ND 4.0: https://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Original Article
Kim, Hyun-Ji
Baek, Eun Bok
Hwang, Ji-Hee
Lim, Minyoung
Jung, Won Hoon
Bae, Myung Ae
Son, Hwa-Young
Cho, Jae-Woo
Application of convolutional neural network for analyzing hepatic fibrosis in mice
title Application of convolutional neural network for analyzing hepatic fibrosis in mice
title_full Application of convolutional neural network for analyzing hepatic fibrosis in mice
title_fullStr Application of convolutional neural network for analyzing hepatic fibrosis in mice
title_full_unstemmed Application of convolutional neural network for analyzing hepatic fibrosis in mice
title_short Application of convolutional neural network for analyzing hepatic fibrosis in mice
title_sort application of convolutional neural network for analyzing hepatic fibrosis in mice
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9837472/
https://www.ncbi.nlm.nih.gov/pubmed/36683726
http://dx.doi.org/10.1293/tox.2022-0066
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