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A noval prognostic signature of the N7-methylguanosine (m7G)-related miRNA in lung adenocarcinoma

BACKGROUND: Lung adenocarcinoma (LUAD) is characterized by high morbidity and mortality rates and poor prognosis. N7-methylguanosine play an increasingly vital role in lung adenocarcinoma. However, the prognostic value of N7-methylguanosine related-miRNAs in lung adenocarcinoma remains unclear. METH...

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Autores principales: Duan, Han-ping, Yan, Jian-hui, Nie, Lin, Wang, Ye, Xie, Hui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9838007/
https://www.ncbi.nlm.nih.gov/pubmed/36635678
http://dx.doi.org/10.1186/s12890-022-02290-7
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author Duan, Han-ping
Yan, Jian-hui
Nie, Lin
Wang, Ye
Xie, Hui
author_facet Duan, Han-ping
Yan, Jian-hui
Nie, Lin
Wang, Ye
Xie, Hui
author_sort Duan, Han-ping
collection PubMed
description BACKGROUND: Lung adenocarcinoma (LUAD) is characterized by high morbidity and mortality rates and poor prognosis. N7-methylguanosine play an increasingly vital role in lung adenocarcinoma. However, the prognostic value of N7-methylguanosine related-miRNAs in lung adenocarcinoma remains unclear. METHODS: In the study, the mRNA and miRNA expression profiles and corresponding clinical informations were downloaded from the public database. The prognostic signature was built using least absolute shrinkage and selection operator Cox analysis. The Kaplan–Meier method was used to compare survival outcomes between the high- and low-risk groups. Signatures for the development of lung adenocarcinoma were tested using univariate and multivariate Cox regression models. Single-sample gene set enrichment analysis was used to determine the immune cell infiltration score. First, we predicted METTL1 and WDR4 chemosensitivities based on a public pharmacogenomics database. The area under the receiver operating characteristic curve showed that the performance of signature in 1-,3-, and 5-year survival predictions were 0.68, 0.65, and 0.683, respectively. RESULTS: We established a novel prognostic signature consisting of 9 N7-Methylguanosine related miRNAs using least absolute shrinkage and selection operator Cox analysis. Patients in the high-risk group had shorter survival times than those in the low-risk group did. The calibration curves at 1, 3, and 5-year also illustrate the high predictive power of the structure. Signature was corrected using the Toumor stage. The expression levels of METTL1 and WDR4 significantly correlated with the sensitivity of cancer cells to antitumor drugs. CONCLUSIONS: A novel signature constructed using 9 N7-methylguanosine related-miRNAs can be used for prognostic prediction. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12890-022-02290-7.
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spelling pubmed-98380072023-01-14 A noval prognostic signature of the N7-methylguanosine (m7G)-related miRNA in lung adenocarcinoma Duan, Han-ping Yan, Jian-hui Nie, Lin Wang, Ye Xie, Hui BMC Pulm Med Research BACKGROUND: Lung adenocarcinoma (LUAD) is characterized by high morbidity and mortality rates and poor prognosis. N7-methylguanosine play an increasingly vital role in lung adenocarcinoma. However, the prognostic value of N7-methylguanosine related-miRNAs in lung adenocarcinoma remains unclear. METHODS: In the study, the mRNA and miRNA expression profiles and corresponding clinical informations were downloaded from the public database. The prognostic signature was built using least absolute shrinkage and selection operator Cox analysis. The Kaplan–Meier method was used to compare survival outcomes between the high- and low-risk groups. Signatures for the development of lung adenocarcinoma were tested using univariate and multivariate Cox regression models. Single-sample gene set enrichment analysis was used to determine the immune cell infiltration score. First, we predicted METTL1 and WDR4 chemosensitivities based on a public pharmacogenomics database. The area under the receiver operating characteristic curve showed that the performance of signature in 1-,3-, and 5-year survival predictions were 0.68, 0.65, and 0.683, respectively. RESULTS: We established a novel prognostic signature consisting of 9 N7-Methylguanosine related miRNAs using least absolute shrinkage and selection operator Cox analysis. Patients in the high-risk group had shorter survival times than those in the low-risk group did. The calibration curves at 1, 3, and 5-year also illustrate the high predictive power of the structure. Signature was corrected using the Toumor stage. The expression levels of METTL1 and WDR4 significantly correlated with the sensitivity of cancer cells to antitumor drugs. CONCLUSIONS: A novel signature constructed using 9 N7-methylguanosine related-miRNAs can be used for prognostic prediction. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12890-022-02290-7. BioMed Central 2023-01-12 /pmc/articles/PMC9838007/ /pubmed/36635678 http://dx.doi.org/10.1186/s12890-022-02290-7 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Duan, Han-ping
Yan, Jian-hui
Nie, Lin
Wang, Ye
Xie, Hui
A noval prognostic signature of the N7-methylguanosine (m7G)-related miRNA in lung adenocarcinoma
title A noval prognostic signature of the N7-methylguanosine (m7G)-related miRNA in lung adenocarcinoma
title_full A noval prognostic signature of the N7-methylguanosine (m7G)-related miRNA in lung adenocarcinoma
title_fullStr A noval prognostic signature of the N7-methylguanosine (m7G)-related miRNA in lung adenocarcinoma
title_full_unstemmed A noval prognostic signature of the N7-methylguanosine (m7G)-related miRNA in lung adenocarcinoma
title_short A noval prognostic signature of the N7-methylguanosine (m7G)-related miRNA in lung adenocarcinoma
title_sort noval prognostic signature of the n7-methylguanosine (m7g)-related mirna in lung adenocarcinoma
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9838007/
https://www.ncbi.nlm.nih.gov/pubmed/36635678
http://dx.doi.org/10.1186/s12890-022-02290-7
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