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CMTM6 is highly expressed in lung adenocarcinoma and can be used as a biomarker of a poor diagnosis
BACKGROUND: CMTM6 which is chemokine-like factor (CKLF)-like Marvel transmembrane domain containing family member 6 is involved in the occurrence and progression of various tumors. However, the role of CMTM6 is still unclear in lung adenocarcinoma (LUAD). METHODS: Immunohistochemical, Western blotti...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9838204/ https://www.ncbi.nlm.nih.gov/pubmed/36643629 http://dx.doi.org/10.7717/peerj.14668 |
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author | Jia, Daqi Xiong, Li Xue, Honggang Li, Jidong |
author_facet | Jia, Daqi Xiong, Li Xue, Honggang Li, Jidong |
author_sort | Jia, Daqi |
collection | PubMed |
description | BACKGROUND: CMTM6 which is chemokine-like factor (CKLF)-like Marvel transmembrane domain containing family member 6 is involved in the occurrence and progression of various tumors. However, the role of CMTM6 is still unclear in lung adenocarcinoma (LUAD). METHODS: Immunohistochemical, Western blotting and RT‒PCR methods were used to detect the expression of CMTM6 in LUAD. Cox regression and the Kaplan‒Meier method were performed to assess overall survival. Immunogenic features were evaluated according to immune cell infiltrations, immune checkpoints. The sensitivity to chemotherapy agents was estimated using the pRRophetic package. RESULTS: In LUAD, the expression of CMTM6 was obviously upregulated and was significantly associated with T stage (p = 0.008) and lymph node metastasis (p = 0.018). Multivariate Cox regression analysis demonstrated that CMTM6 was a specialty prognostic risk factor. Based on GSEA enrichment analysis, we found that high expression of CMTM6 is associated with multiple immune signaling pathways. The group with high CMTM6 expression showed a positive association with various types of tumor-infiltrating cells. Moreover, a total of 36 chemotherapeutic drugs were significantly correlated with the expression of CMTM6. Among them, two chemotherapeutic drugs had better therapeutic effects in the high CMTM6 expression group, while 34 chemotherapeutic drugs had therapeutic effects in the low CMTM6 expression group. CONCLUSION: This study confirmed that CMTM6 is highly expressed in LUAD and is a new independent poor prognostic factor. In addition, the high expression of CMTM6 is closely related to the tumor microenvironment and immunotherapy, providing new ideas for the treatment of posterior LUAD. |
format | Online Article Text |
id | pubmed-9838204 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-98382042023-01-14 CMTM6 is highly expressed in lung adenocarcinoma and can be used as a biomarker of a poor diagnosis Jia, Daqi Xiong, Li Xue, Honggang Li, Jidong PeerJ Bioinformatics BACKGROUND: CMTM6 which is chemokine-like factor (CKLF)-like Marvel transmembrane domain containing family member 6 is involved in the occurrence and progression of various tumors. However, the role of CMTM6 is still unclear in lung adenocarcinoma (LUAD). METHODS: Immunohistochemical, Western blotting and RT‒PCR methods were used to detect the expression of CMTM6 in LUAD. Cox regression and the Kaplan‒Meier method were performed to assess overall survival. Immunogenic features were evaluated according to immune cell infiltrations, immune checkpoints. The sensitivity to chemotherapy agents was estimated using the pRRophetic package. RESULTS: In LUAD, the expression of CMTM6 was obviously upregulated and was significantly associated with T stage (p = 0.008) and lymph node metastasis (p = 0.018). Multivariate Cox regression analysis demonstrated that CMTM6 was a specialty prognostic risk factor. Based on GSEA enrichment analysis, we found that high expression of CMTM6 is associated with multiple immune signaling pathways. The group with high CMTM6 expression showed a positive association with various types of tumor-infiltrating cells. Moreover, a total of 36 chemotherapeutic drugs were significantly correlated with the expression of CMTM6. Among them, two chemotherapeutic drugs had better therapeutic effects in the high CMTM6 expression group, while 34 chemotherapeutic drugs had therapeutic effects in the low CMTM6 expression group. CONCLUSION: This study confirmed that CMTM6 is highly expressed in LUAD and is a new independent poor prognostic factor. In addition, the high expression of CMTM6 is closely related to the tumor microenvironment and immunotherapy, providing new ideas for the treatment of posterior LUAD. PeerJ Inc. 2023-01-10 /pmc/articles/PMC9838204/ /pubmed/36643629 http://dx.doi.org/10.7717/peerj.14668 Text en © 2023 Jia et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Bioinformatics Jia, Daqi Xiong, Li Xue, Honggang Li, Jidong CMTM6 is highly expressed in lung adenocarcinoma and can be used as a biomarker of a poor diagnosis |
title | CMTM6 is highly expressed in lung adenocarcinoma and can be used as a biomarker of a poor diagnosis |
title_full | CMTM6 is highly expressed in lung adenocarcinoma and can be used as a biomarker of a poor diagnosis |
title_fullStr | CMTM6 is highly expressed in lung adenocarcinoma and can be used as a biomarker of a poor diagnosis |
title_full_unstemmed | CMTM6 is highly expressed in lung adenocarcinoma and can be used as a biomarker of a poor diagnosis |
title_short | CMTM6 is highly expressed in lung adenocarcinoma and can be used as a biomarker of a poor diagnosis |
title_sort | cmtm6 is highly expressed in lung adenocarcinoma and can be used as a biomarker of a poor diagnosis |
topic | Bioinformatics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9838204/ https://www.ncbi.nlm.nih.gov/pubmed/36643629 http://dx.doi.org/10.7717/peerj.14668 |
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