Cargando…
Isopsoralen suppresses receptor activator of nuclear factor kappa-β ligand-induced osteoclastogenesis by inhibiting the NF-κB signaling
Osteoporosis is a serious systemic metabolic bone system disease.This study aimed to identify the target genes of isopsoralen and the signaling pathways involved in the differential expression of the genes involved in osteoclast differentiation. We hypothesized that isopsoralen may inhibit osteoclas...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9838210/ https://www.ncbi.nlm.nih.gov/pubmed/36643647 http://dx.doi.org/10.7717/peerj.14560 |
_version_ | 1784869232397254656 |
---|---|
author | Zhan, Wanda Ruan, Binjia Dong, Hui Wang, Chaoyong Wu, Shuangshi Yu, Hang Xu, Xiaohang Sun, Hao Cai, Jun |
author_facet | Zhan, Wanda Ruan, Binjia Dong, Hui Wang, Chaoyong Wu, Shuangshi Yu, Hang Xu, Xiaohang Sun, Hao Cai, Jun |
author_sort | Zhan, Wanda |
collection | PubMed |
description | Osteoporosis is a serious systemic metabolic bone system disease.This study aimed to identify the target genes of isopsoralen and the signaling pathways involved in the differential expression of the genes involved in osteoclast differentiation. We hypothesized that isopsoralen may inhibit osteoclast differentiation by blocking the nuclear factor kappa-B (NF-κB) signaling pathway and verified our hypothesis through basic experiments. The 3-(4, 5-dimethylthiazol-2-yl)-2, 5-diphenyltetrazolium bromide (MTT) assay was used to detect the effect of isopsoralen on the proliferation and viability of primary mouse bone marrow monocytes (BMMCs). The effect of isopsoralen on receptor activator of nuclear factor kappa-B ligand (RANKL)-induced osteoclast differentiation was determined by using tartrate-resistant acid phosphatase (TRAP) staining. Quantitative real-time PCR (qRT-PCR) and Western blot were used to detect the expression of the related genes and proteins. The Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway of isopsoralen target genes were obtained through comprehensive analysis using the STITCH database, Cytoscape 3.8.2, and R-Studio software. Differentially expressed genes (DEGs) were found in osteoclasts induced by RANKL before and after 3 days using R-Studio, following which KEGG analysis was performed. Next, enrichment analysis was performed on the KEGG pathway shared by the target genes of isopsoralen and the differentially expressed genes during osteoclast differentiation to predict the signaling pathway underlying the inhibition of osteoclast differentiation by isopsoralen. Finally, Western blot was used to detect the effect of isopsoralen on the activation of signaling pathways to verify the results of our bioinformatics analysis. Based on the enrichment analysis of isopsoralen target genes and differentially expressed genes during osteoclastogenesis, we believe that isopsoralen can inhibit RANKL-induced osteoclastogenesis by inhibiting the NF-κB signaling pathway. |
format | Online Article Text |
id | pubmed-9838210 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-98382102023-01-14 Isopsoralen suppresses receptor activator of nuclear factor kappa-β ligand-induced osteoclastogenesis by inhibiting the NF-κB signaling Zhan, Wanda Ruan, Binjia Dong, Hui Wang, Chaoyong Wu, Shuangshi Yu, Hang Xu, Xiaohang Sun, Hao Cai, Jun PeerJ Biochemistry Osteoporosis is a serious systemic metabolic bone system disease.This study aimed to identify the target genes of isopsoralen and the signaling pathways involved in the differential expression of the genes involved in osteoclast differentiation. We hypothesized that isopsoralen may inhibit osteoclast differentiation by blocking the nuclear factor kappa-B (NF-κB) signaling pathway and verified our hypothesis through basic experiments. The 3-(4, 5-dimethylthiazol-2-yl)-2, 5-diphenyltetrazolium bromide (MTT) assay was used to detect the effect of isopsoralen on the proliferation and viability of primary mouse bone marrow monocytes (BMMCs). The effect of isopsoralen on receptor activator of nuclear factor kappa-B ligand (RANKL)-induced osteoclast differentiation was determined by using tartrate-resistant acid phosphatase (TRAP) staining. Quantitative real-time PCR (qRT-PCR) and Western blot were used to detect the expression of the related genes and proteins. The Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway of isopsoralen target genes were obtained through comprehensive analysis using the STITCH database, Cytoscape 3.8.2, and R-Studio software. Differentially expressed genes (DEGs) were found in osteoclasts induced by RANKL before and after 3 days using R-Studio, following which KEGG analysis was performed. Next, enrichment analysis was performed on the KEGG pathway shared by the target genes of isopsoralen and the differentially expressed genes during osteoclast differentiation to predict the signaling pathway underlying the inhibition of osteoclast differentiation by isopsoralen. Finally, Western blot was used to detect the effect of isopsoralen on the activation of signaling pathways to verify the results of our bioinformatics analysis. Based on the enrichment analysis of isopsoralen target genes and differentially expressed genes during osteoclastogenesis, we believe that isopsoralen can inhibit RANKL-induced osteoclastogenesis by inhibiting the NF-κB signaling pathway. PeerJ Inc. 2023-01-10 /pmc/articles/PMC9838210/ /pubmed/36643647 http://dx.doi.org/10.7717/peerj.14560 Text en ©2022 Zhan et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Biochemistry Zhan, Wanda Ruan, Binjia Dong, Hui Wang, Chaoyong Wu, Shuangshi Yu, Hang Xu, Xiaohang Sun, Hao Cai, Jun Isopsoralen suppresses receptor activator of nuclear factor kappa-β ligand-induced osteoclastogenesis by inhibiting the NF-κB signaling |
title | Isopsoralen suppresses receptor activator of nuclear factor kappa-β ligand-induced osteoclastogenesis by inhibiting the NF-κB signaling |
title_full | Isopsoralen suppresses receptor activator of nuclear factor kappa-β ligand-induced osteoclastogenesis by inhibiting the NF-κB signaling |
title_fullStr | Isopsoralen suppresses receptor activator of nuclear factor kappa-β ligand-induced osteoclastogenesis by inhibiting the NF-κB signaling |
title_full_unstemmed | Isopsoralen suppresses receptor activator of nuclear factor kappa-β ligand-induced osteoclastogenesis by inhibiting the NF-κB signaling |
title_short | Isopsoralen suppresses receptor activator of nuclear factor kappa-β ligand-induced osteoclastogenesis by inhibiting the NF-κB signaling |
title_sort | isopsoralen suppresses receptor activator of nuclear factor kappa-β ligand-induced osteoclastogenesis by inhibiting the nf-κb signaling |
topic | Biochemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9838210/ https://www.ncbi.nlm.nih.gov/pubmed/36643647 http://dx.doi.org/10.7717/peerj.14560 |
work_keys_str_mv | AT zhanwanda isopsoralensuppressesreceptoractivatorofnuclearfactorkappabligandinducedosteoclastogenesisbyinhibitingthenfkbsignaling AT ruanbinjia isopsoralensuppressesreceptoractivatorofnuclearfactorkappabligandinducedosteoclastogenesisbyinhibitingthenfkbsignaling AT donghui isopsoralensuppressesreceptoractivatorofnuclearfactorkappabligandinducedosteoclastogenesisbyinhibitingthenfkbsignaling AT wangchaoyong isopsoralensuppressesreceptoractivatorofnuclearfactorkappabligandinducedosteoclastogenesisbyinhibitingthenfkbsignaling AT wushuangshi isopsoralensuppressesreceptoractivatorofnuclearfactorkappabligandinducedosteoclastogenesisbyinhibitingthenfkbsignaling AT yuhang isopsoralensuppressesreceptoractivatorofnuclearfactorkappabligandinducedosteoclastogenesisbyinhibitingthenfkbsignaling AT xuxiaohang isopsoralensuppressesreceptoractivatorofnuclearfactorkappabligandinducedosteoclastogenesisbyinhibitingthenfkbsignaling AT sunhao isopsoralensuppressesreceptoractivatorofnuclearfactorkappabligandinducedosteoclastogenesisbyinhibitingthenfkbsignaling AT caijun isopsoralensuppressesreceptoractivatorofnuclearfactorkappabligandinducedosteoclastogenesisbyinhibitingthenfkbsignaling |