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Prospective study and validation of early warning marker discovery based on integrating multi-omics analysis in severe burn patients with sepsis
BACKGROUND: Early detection, timely diagnosis and rapid response are essential for case management and precautions of burn-associated sepsis. However, studies on indicators for early warning and intervention have rarely been conducted. This study was performed to better understand the pathophysiolog...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9840905/ https://www.ncbi.nlm.nih.gov/pubmed/36659877 http://dx.doi.org/10.1093/burnst/tkac050 |
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author | Huang, Jiamin Chen, Yi Guo, Zaiwen Yu, Yanzhen Zhang, Yi Li, Pingsong Shi, Lei Lv, Guozhong Sun, Bingwei |
author_facet | Huang, Jiamin Chen, Yi Guo, Zaiwen Yu, Yanzhen Zhang, Yi Li, Pingsong Shi, Lei Lv, Guozhong Sun, Bingwei |
author_sort | Huang, Jiamin |
collection | PubMed |
description | BACKGROUND: Early detection, timely diagnosis and rapid response are essential for case management and precautions of burn-associated sepsis. However, studies on indicators for early warning and intervention have rarely been conducted. This study was performed to better understand the pathophysiological changes and targets for prevention of severe burn injuries. METHODS: We conducted a multi-center, prospective multi-omics study, including genomics, microRNAomics, proteomics and single-cell transcriptomics, in 60 patients with severe burn injuries. A mouse model of severe burn injuries was also constructed to verify the early warning ability and therapeutic effects of potential markers. RESULTS: Through genomic analysis, we identified seven important susceptibility genes (DNAH11, LAMA2, ABCA2, ZFAND4, CEP290, MUC20 and ENTPD1) in patients with severe burn injuries complicated with sepsis. Through plasma miRNAomics studies, we identified four miRNAs (hsa-miR-16-5p, hsa-miR-185-5p, hsa-miR-451a and hsa-miR-423-5p) that may serve as early warning markers of burn-associated sepsis. A proteomic study indicated the changes in abundance of major proteins at different time points after severe burn injury and revealed the candidate early warning markers S100A8 and SERPINA10. In addition, the proteomic analysis indicated that neutrophils play an important role in the pathogenesis of severe burn injuries, as also supported by findings from single-cell transcriptome sequencing of neutrophils. Through further studies on severely burned mice, we determined that S100A8 is also a potential early therapeutic target for severe burn injuries, beyond being an early warning indicator. CONCLUSIONS: Our multi-omics study identified seven susceptibility genes, four miRNAs and two proteins as early warning markers for severe burn-associated sepsis. In severe burn-associated sepsis, the protein S100A8 has both warning and therapeutic effects. |
format | Online Article Text |
id | pubmed-9840905 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-98409052023-01-18 Prospective study and validation of early warning marker discovery based on integrating multi-omics analysis in severe burn patients with sepsis Huang, Jiamin Chen, Yi Guo, Zaiwen Yu, Yanzhen Zhang, Yi Li, Pingsong Shi, Lei Lv, Guozhong Sun, Bingwei Burns Trauma Research Article BACKGROUND: Early detection, timely diagnosis and rapid response are essential for case management and precautions of burn-associated sepsis. However, studies on indicators for early warning and intervention have rarely been conducted. This study was performed to better understand the pathophysiological changes and targets for prevention of severe burn injuries. METHODS: We conducted a multi-center, prospective multi-omics study, including genomics, microRNAomics, proteomics and single-cell transcriptomics, in 60 patients with severe burn injuries. A mouse model of severe burn injuries was also constructed to verify the early warning ability and therapeutic effects of potential markers. RESULTS: Through genomic analysis, we identified seven important susceptibility genes (DNAH11, LAMA2, ABCA2, ZFAND4, CEP290, MUC20 and ENTPD1) in patients with severe burn injuries complicated with sepsis. Through plasma miRNAomics studies, we identified four miRNAs (hsa-miR-16-5p, hsa-miR-185-5p, hsa-miR-451a and hsa-miR-423-5p) that may serve as early warning markers of burn-associated sepsis. A proteomic study indicated the changes in abundance of major proteins at different time points after severe burn injury and revealed the candidate early warning markers S100A8 and SERPINA10. In addition, the proteomic analysis indicated that neutrophils play an important role in the pathogenesis of severe burn injuries, as also supported by findings from single-cell transcriptome sequencing of neutrophils. Through further studies on severely burned mice, we determined that S100A8 is also a potential early therapeutic target for severe burn injuries, beyond being an early warning indicator. CONCLUSIONS: Our multi-omics study identified seven susceptibility genes, four miRNAs and two proteins as early warning markers for severe burn-associated sepsis. In severe burn-associated sepsis, the protein S100A8 has both warning and therapeutic effects. Oxford University Press 2023-01-15 /pmc/articles/PMC9840905/ /pubmed/36659877 http://dx.doi.org/10.1093/burnst/tkac050 Text en © The Author(s) 2023. Published by Oxford University Press. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Huang, Jiamin Chen, Yi Guo, Zaiwen Yu, Yanzhen Zhang, Yi Li, Pingsong Shi, Lei Lv, Guozhong Sun, Bingwei Prospective study and validation of early warning marker discovery based on integrating multi-omics analysis in severe burn patients with sepsis |
title | Prospective study and validation of early warning marker discovery based on integrating multi-omics analysis in severe burn patients with sepsis |
title_full | Prospective study and validation of early warning marker discovery based on integrating multi-omics analysis in severe burn patients with sepsis |
title_fullStr | Prospective study and validation of early warning marker discovery based on integrating multi-omics analysis in severe burn patients with sepsis |
title_full_unstemmed | Prospective study and validation of early warning marker discovery based on integrating multi-omics analysis in severe burn patients with sepsis |
title_short | Prospective study and validation of early warning marker discovery based on integrating multi-omics analysis in severe burn patients with sepsis |
title_sort | prospective study and validation of early warning marker discovery based on integrating multi-omics analysis in severe burn patients with sepsis |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9840905/ https://www.ncbi.nlm.nih.gov/pubmed/36659877 http://dx.doi.org/10.1093/burnst/tkac050 |
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