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A novel platform using homobifunctional hydrazide for enrichment and isolation of urinary circulating RNAs
Changes in specific circulating RNA (circRNA) expressions can serve as diagnostic noninvasive biomarkers for prostate cancer (PCa). However, there are still unmet needs, such as unclear types and roles of circRNAs, PCa detection in benign prostatic hyperplasia (BPH) by unstandardized methods, and li...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley & Sons, Inc.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9842063/ https://www.ncbi.nlm.nih.gov/pubmed/36684108 http://dx.doi.org/10.1002/btm2.10348 |
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author | Koo, Bonhan Kim, Yunlim Jang, Yoon Ok Liu, Huifang Kim, Myoung Gyu Lee, Hyo Joo Woo, Myung Kyun Kim, Choung‐Soo Shin, Yong |
author_facet | Koo, Bonhan Kim, Yunlim Jang, Yoon Ok Liu, Huifang Kim, Myoung Gyu Lee, Hyo Joo Woo, Myung Kyun Kim, Choung‐Soo Shin, Yong |
author_sort | Koo, Bonhan |
collection | PubMed |
description | Changes in specific circulating RNA (circRNA) expressions can serve as diagnostic noninvasive biomarkers for prostate cancer (PCa). However, there are still unmet needs, such as unclear types and roles of circRNAs, PCa detection in benign prostatic hyperplasia (BPH) by unstandardized methods, and limitations of sample volume capacity and low circRNA concentrations. This study reports a simple and rapid circRNA enrichment and isolation technique named “HAZIS‐CirR” for the analysis of urinary circRNAs. The method utilizes homobifunctional hydrazides with amine‐modified zeolite and polyvinylidene fluoride (PVDF) syringe filtration for combining electrostatic and covalent coupling and size‐based filtration, and it offers instrument‐free isolation of circRNAs in 20 min without volume limitation, thermoregulation, and lysis. HAZIS‐CirR has high capture efficiency (82.03%–92.38%) and a 10‐fold more sensitive detection limit (20 fM) than before enrichment (200 fM). The clinical utility of HAZIS‐CirR is confirmed by analyzing circulating mRNAs and circulating miRNAs in 89 urine samples. Furthermore, three miRNA panels that differentiate PCa from BPH and control, PCa from control, and BPH from control, respectively, are established by comparing miRNA levels. HAZIS‐CirR will be used as an optimal and established method for the enrichment and isolation of circRNAs as diagnostic, prognostic, and predictive biomarkers in human cancers. |
format | Online Article Text |
id | pubmed-9842063 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley & Sons, Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-98420632023-01-19 A novel platform using homobifunctional hydrazide for enrichment and isolation of urinary circulating RNAs Koo, Bonhan Kim, Yunlim Jang, Yoon Ok Liu, Huifang Kim, Myoung Gyu Lee, Hyo Joo Woo, Myung Kyun Kim, Choung‐Soo Shin, Yong Bioeng Transl Med Research Articles Changes in specific circulating RNA (circRNA) expressions can serve as diagnostic noninvasive biomarkers for prostate cancer (PCa). However, there are still unmet needs, such as unclear types and roles of circRNAs, PCa detection in benign prostatic hyperplasia (BPH) by unstandardized methods, and limitations of sample volume capacity and low circRNA concentrations. This study reports a simple and rapid circRNA enrichment and isolation technique named “HAZIS‐CirR” for the analysis of urinary circRNAs. The method utilizes homobifunctional hydrazides with amine‐modified zeolite and polyvinylidene fluoride (PVDF) syringe filtration for combining electrostatic and covalent coupling and size‐based filtration, and it offers instrument‐free isolation of circRNAs in 20 min without volume limitation, thermoregulation, and lysis. HAZIS‐CirR has high capture efficiency (82.03%–92.38%) and a 10‐fold more sensitive detection limit (20 fM) than before enrichment (200 fM). The clinical utility of HAZIS‐CirR is confirmed by analyzing circulating mRNAs and circulating miRNAs in 89 urine samples. Furthermore, three miRNA panels that differentiate PCa from BPH and control, PCa from control, and BPH from control, respectively, are established by comparing miRNA levels. HAZIS‐CirR will be used as an optimal and established method for the enrichment and isolation of circRNAs as diagnostic, prognostic, and predictive biomarkers in human cancers. John Wiley & Sons, Inc. 2022-06-03 /pmc/articles/PMC9842063/ /pubmed/36684108 http://dx.doi.org/10.1002/btm2.10348 Text en © 2022 The Authors. Bioengineering & Translational Medicine published by Wiley Periodicals LLC on behalf of American Institute of Chemical Engineers. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Articles Koo, Bonhan Kim, Yunlim Jang, Yoon Ok Liu, Huifang Kim, Myoung Gyu Lee, Hyo Joo Woo, Myung Kyun Kim, Choung‐Soo Shin, Yong A novel platform using homobifunctional hydrazide for enrichment and isolation of urinary circulating RNAs |
title | A novel platform using homobifunctional hydrazide for enrichment and isolation of urinary circulating RNAs
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title_full | A novel platform using homobifunctional hydrazide for enrichment and isolation of urinary circulating RNAs
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title_fullStr | A novel platform using homobifunctional hydrazide for enrichment and isolation of urinary circulating RNAs
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title_full_unstemmed | A novel platform using homobifunctional hydrazide for enrichment and isolation of urinary circulating RNAs
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title_short | A novel platform using homobifunctional hydrazide for enrichment and isolation of urinary circulating RNAs
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title_sort | novel platform using homobifunctional hydrazide for enrichment and isolation of urinary circulating rnas |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9842063/ https://www.ncbi.nlm.nih.gov/pubmed/36684108 http://dx.doi.org/10.1002/btm2.10348 |
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