Cargando…
Polygenic risk score for tumor aggressiveness and early-onset prostate cancer in Asians
We attempted to assess the performance of an ethnic-specific polygenic risk score (PRS) designed from a Korean population to predict aggressive prostate cancer (PCa) and early-onset (age < 60). A PRS score comprised of 22 SNPs was computed in 3695 patients gathered from one of 4 tertiary centers...
Autores principales: | , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9842611/ https://www.ncbi.nlm.nih.gov/pubmed/36646726 http://dx.doi.org/10.1038/s41598-022-17515-2 |
_version_ | 1784870174220877824 |
---|---|
author | Song, Sang Hun Kim, Eunae Jung, Yu Jin Kim, Hak-Min Park, Moon Soo Kim, Jung Kwon Lee, Hakmin Oh, Jong Jin Lee, Sangchul Hong, Sung Kyu Byun, Seok-Soo |
author_facet | Song, Sang Hun Kim, Eunae Jung, Yu Jin Kim, Hak-Min Park, Moon Soo Kim, Jung Kwon Lee, Hakmin Oh, Jong Jin Lee, Sangchul Hong, Sung Kyu Byun, Seok-Soo |
author_sort | Song, Sang Hun |
collection | PubMed |
description | We attempted to assess the performance of an ethnic-specific polygenic risk score (PRS) designed from a Korean population to predict aggressive prostate cancer (PCa) and early-onset (age < 60). A PRS score comprised of 22 SNPs was computed in 3695 patients gathered from one of 4 tertiary centers in Korea. Males with biopsy or radical prostatectomy-proven PCa were included for analysis, collecting additional clinical parameters such as age, BMI, PSA, Gleason Group (GG), and staging. Patients were divided into 4 groups of PRS quartiles. Intergroup differences were assessed, as well as risk ratio and predictive performance based on GG using logistic regression analysis and AUC. No significant intergroup differences were observed for BMI, PSA, and rate of ≥ T3a tumors on pathology. Rate of GG ≥ 2, GG ≥ 3, and GG ≥ 4 showed a significant pattern of increase by PRS quartile (p < 0.001, < 0.001, and 0.039, respectively). With the lowest PRS quartile as reference, higher PRS groups showed sequentially escalating risk for GG ≥ 2 and GG ≥ 3 pathology, with a 4.6-fold rise in GG ≥ 2 (p < 0.001) and 2.0-fold rise in GG ≥ 3 (p < 0.001) for the highest PRS quartiles. Combining PRS with PSA improved prediction of early onset csPCa (AUC 0.759) compared to PRS (AUC 0.627) and PSA alone (AUC 0.736). To conclude, an ethnic-specific PRS was found to predict susceptibility of aggressive PCa in addition to improving detection of csPCa when combined with PSA in early onset populations. PRS may have a role as a risk-stratification model in actual practice. Large scale, multi-ethnic trials are required to validate our results. |
format | Online Article Text |
id | pubmed-9842611 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-98426112023-01-18 Polygenic risk score for tumor aggressiveness and early-onset prostate cancer in Asians Song, Sang Hun Kim, Eunae Jung, Yu Jin Kim, Hak-Min Park, Moon Soo Kim, Jung Kwon Lee, Hakmin Oh, Jong Jin Lee, Sangchul Hong, Sung Kyu Byun, Seok-Soo Sci Rep Article We attempted to assess the performance of an ethnic-specific polygenic risk score (PRS) designed from a Korean population to predict aggressive prostate cancer (PCa) and early-onset (age < 60). A PRS score comprised of 22 SNPs was computed in 3695 patients gathered from one of 4 tertiary centers in Korea. Males with biopsy or radical prostatectomy-proven PCa were included for analysis, collecting additional clinical parameters such as age, BMI, PSA, Gleason Group (GG), and staging. Patients were divided into 4 groups of PRS quartiles. Intergroup differences were assessed, as well as risk ratio and predictive performance based on GG using logistic regression analysis and AUC. No significant intergroup differences were observed for BMI, PSA, and rate of ≥ T3a tumors on pathology. Rate of GG ≥ 2, GG ≥ 3, and GG ≥ 4 showed a significant pattern of increase by PRS quartile (p < 0.001, < 0.001, and 0.039, respectively). With the lowest PRS quartile as reference, higher PRS groups showed sequentially escalating risk for GG ≥ 2 and GG ≥ 3 pathology, with a 4.6-fold rise in GG ≥ 2 (p < 0.001) and 2.0-fold rise in GG ≥ 3 (p < 0.001) for the highest PRS quartiles. Combining PRS with PSA improved prediction of early onset csPCa (AUC 0.759) compared to PRS (AUC 0.627) and PSA alone (AUC 0.736). To conclude, an ethnic-specific PRS was found to predict susceptibility of aggressive PCa in addition to improving detection of csPCa when combined with PSA in early onset populations. PRS may have a role as a risk-stratification model in actual practice. Large scale, multi-ethnic trials are required to validate our results. Nature Publishing Group UK 2023-01-16 /pmc/articles/PMC9842611/ /pubmed/36646726 http://dx.doi.org/10.1038/s41598-022-17515-2 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Song, Sang Hun Kim, Eunae Jung, Yu Jin Kim, Hak-Min Park, Moon Soo Kim, Jung Kwon Lee, Hakmin Oh, Jong Jin Lee, Sangchul Hong, Sung Kyu Byun, Seok-Soo Polygenic risk score for tumor aggressiveness and early-onset prostate cancer in Asians |
title | Polygenic risk score for tumor aggressiveness and early-onset prostate cancer in Asians |
title_full | Polygenic risk score for tumor aggressiveness and early-onset prostate cancer in Asians |
title_fullStr | Polygenic risk score for tumor aggressiveness and early-onset prostate cancer in Asians |
title_full_unstemmed | Polygenic risk score for tumor aggressiveness and early-onset prostate cancer in Asians |
title_short | Polygenic risk score for tumor aggressiveness and early-onset prostate cancer in Asians |
title_sort | polygenic risk score for tumor aggressiveness and early-onset prostate cancer in asians |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9842611/ https://www.ncbi.nlm.nih.gov/pubmed/36646726 http://dx.doi.org/10.1038/s41598-022-17515-2 |
work_keys_str_mv | AT songsanghun polygenicriskscorefortumoraggressivenessandearlyonsetprostatecancerinasians AT kimeunae polygenicriskscorefortumoraggressivenessandearlyonsetprostatecancerinasians AT jungyujin polygenicriskscorefortumoraggressivenessandearlyonsetprostatecancerinasians AT kimhakmin polygenicriskscorefortumoraggressivenessandearlyonsetprostatecancerinasians AT parkmoonsoo polygenicriskscorefortumoraggressivenessandearlyonsetprostatecancerinasians AT kimjungkwon polygenicriskscorefortumoraggressivenessandearlyonsetprostatecancerinasians AT leehakmin polygenicriskscorefortumoraggressivenessandearlyonsetprostatecancerinasians AT ohjongjin polygenicriskscorefortumoraggressivenessandearlyonsetprostatecancerinasians AT leesangchul polygenicriskscorefortumoraggressivenessandearlyonsetprostatecancerinasians AT hongsungkyu polygenicriskscorefortumoraggressivenessandearlyonsetprostatecancerinasians AT byunseoksoo polygenicriskscorefortumoraggressivenessandearlyonsetprostatecancerinasians |