Cargando…

Polygenic risk score for tumor aggressiveness and early-onset prostate cancer in Asians

We attempted to assess the performance of an ethnic-specific polygenic risk score (PRS) designed from a Korean population to predict aggressive prostate cancer (PCa) and early-onset (age < 60). A PRS score comprised of 22 SNPs was computed in 3695 patients gathered from one of 4 tertiary centers...

Descripción completa

Detalles Bibliográficos
Autores principales: Song, Sang Hun, Kim, Eunae, Jung, Yu Jin, Kim, Hak-Min, Park, Moon Soo, Kim, Jung Kwon, Lee, Hakmin, Oh, Jong Jin, Lee, Sangchul, Hong, Sung Kyu, Byun, Seok-Soo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9842611/
https://www.ncbi.nlm.nih.gov/pubmed/36646726
http://dx.doi.org/10.1038/s41598-022-17515-2
_version_ 1784870174220877824
author Song, Sang Hun
Kim, Eunae
Jung, Yu Jin
Kim, Hak-Min
Park, Moon Soo
Kim, Jung Kwon
Lee, Hakmin
Oh, Jong Jin
Lee, Sangchul
Hong, Sung Kyu
Byun, Seok-Soo
author_facet Song, Sang Hun
Kim, Eunae
Jung, Yu Jin
Kim, Hak-Min
Park, Moon Soo
Kim, Jung Kwon
Lee, Hakmin
Oh, Jong Jin
Lee, Sangchul
Hong, Sung Kyu
Byun, Seok-Soo
author_sort Song, Sang Hun
collection PubMed
description We attempted to assess the performance of an ethnic-specific polygenic risk score (PRS) designed from a Korean population to predict aggressive prostate cancer (PCa) and early-onset (age < 60). A PRS score comprised of 22 SNPs was computed in 3695 patients gathered from one of 4 tertiary centers in Korea. Males with biopsy or radical prostatectomy-proven PCa were included for analysis, collecting additional clinical parameters such as age, BMI, PSA, Gleason Group (GG), and staging. Patients were divided into 4 groups of PRS quartiles. Intergroup differences were assessed, as well as risk ratio and predictive performance based on GG using logistic regression analysis and AUC. No significant intergroup differences were observed for BMI, PSA, and rate of ≥ T3a tumors on pathology. Rate of GG ≥ 2, GG ≥ 3, and GG ≥ 4 showed a significant pattern of increase by PRS quartile (p < 0.001, < 0.001, and 0.039, respectively). With the lowest PRS quartile as reference, higher PRS groups showed sequentially escalating risk for GG ≥ 2 and GG ≥ 3 pathology, with a 4.6-fold rise in GG ≥ 2 (p < 0.001) and 2.0-fold rise in GG ≥ 3 (p < 0.001) for the highest PRS quartiles. Combining PRS with PSA improved prediction of early onset csPCa (AUC 0.759) compared to PRS (AUC 0.627) and PSA alone (AUC 0.736). To conclude, an ethnic-specific PRS was found to predict susceptibility of aggressive PCa in addition to improving detection of csPCa when combined with PSA in early onset populations. PRS may have a role as a risk-stratification model in actual practice. Large scale, multi-ethnic trials are required to validate our results.
format Online
Article
Text
id pubmed-9842611
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-98426112023-01-18 Polygenic risk score for tumor aggressiveness and early-onset prostate cancer in Asians Song, Sang Hun Kim, Eunae Jung, Yu Jin Kim, Hak-Min Park, Moon Soo Kim, Jung Kwon Lee, Hakmin Oh, Jong Jin Lee, Sangchul Hong, Sung Kyu Byun, Seok-Soo Sci Rep Article We attempted to assess the performance of an ethnic-specific polygenic risk score (PRS) designed from a Korean population to predict aggressive prostate cancer (PCa) and early-onset (age < 60). A PRS score comprised of 22 SNPs was computed in 3695 patients gathered from one of 4 tertiary centers in Korea. Males with biopsy or radical prostatectomy-proven PCa were included for analysis, collecting additional clinical parameters such as age, BMI, PSA, Gleason Group (GG), and staging. Patients were divided into 4 groups of PRS quartiles. Intergroup differences were assessed, as well as risk ratio and predictive performance based on GG using logistic regression analysis and AUC. No significant intergroup differences were observed for BMI, PSA, and rate of ≥ T3a tumors on pathology. Rate of GG ≥ 2, GG ≥ 3, and GG ≥ 4 showed a significant pattern of increase by PRS quartile (p < 0.001, < 0.001, and 0.039, respectively). With the lowest PRS quartile as reference, higher PRS groups showed sequentially escalating risk for GG ≥ 2 and GG ≥ 3 pathology, with a 4.6-fold rise in GG ≥ 2 (p < 0.001) and 2.0-fold rise in GG ≥ 3 (p < 0.001) for the highest PRS quartiles. Combining PRS with PSA improved prediction of early onset csPCa (AUC 0.759) compared to PRS (AUC 0.627) and PSA alone (AUC 0.736). To conclude, an ethnic-specific PRS was found to predict susceptibility of aggressive PCa in addition to improving detection of csPCa when combined with PSA in early onset populations. PRS may have a role as a risk-stratification model in actual practice. Large scale, multi-ethnic trials are required to validate our results. Nature Publishing Group UK 2023-01-16 /pmc/articles/PMC9842611/ /pubmed/36646726 http://dx.doi.org/10.1038/s41598-022-17515-2 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Song, Sang Hun
Kim, Eunae
Jung, Yu Jin
Kim, Hak-Min
Park, Moon Soo
Kim, Jung Kwon
Lee, Hakmin
Oh, Jong Jin
Lee, Sangchul
Hong, Sung Kyu
Byun, Seok-Soo
Polygenic risk score for tumor aggressiveness and early-onset prostate cancer in Asians
title Polygenic risk score for tumor aggressiveness and early-onset prostate cancer in Asians
title_full Polygenic risk score for tumor aggressiveness and early-onset prostate cancer in Asians
title_fullStr Polygenic risk score for tumor aggressiveness and early-onset prostate cancer in Asians
title_full_unstemmed Polygenic risk score for tumor aggressiveness and early-onset prostate cancer in Asians
title_short Polygenic risk score for tumor aggressiveness and early-onset prostate cancer in Asians
title_sort polygenic risk score for tumor aggressiveness and early-onset prostate cancer in asians
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9842611/
https://www.ncbi.nlm.nih.gov/pubmed/36646726
http://dx.doi.org/10.1038/s41598-022-17515-2
work_keys_str_mv AT songsanghun polygenicriskscorefortumoraggressivenessandearlyonsetprostatecancerinasians
AT kimeunae polygenicriskscorefortumoraggressivenessandearlyonsetprostatecancerinasians
AT jungyujin polygenicriskscorefortumoraggressivenessandearlyonsetprostatecancerinasians
AT kimhakmin polygenicriskscorefortumoraggressivenessandearlyonsetprostatecancerinasians
AT parkmoonsoo polygenicriskscorefortumoraggressivenessandearlyonsetprostatecancerinasians
AT kimjungkwon polygenicriskscorefortumoraggressivenessandearlyonsetprostatecancerinasians
AT leehakmin polygenicriskscorefortumoraggressivenessandearlyonsetprostatecancerinasians
AT ohjongjin polygenicriskscorefortumoraggressivenessandearlyonsetprostatecancerinasians
AT leesangchul polygenicriskscorefortumoraggressivenessandearlyonsetprostatecancerinasians
AT hongsungkyu polygenicriskscorefortumoraggressivenessandearlyonsetprostatecancerinasians
AT byunseoksoo polygenicriskscorefortumoraggressivenessandearlyonsetprostatecancerinasians