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Improving the accuracy of (31)P NMR chemical shift calculations by use of scaling methods

Calculation of (31)P NMR chemical shifts for a series of tri- and tetracoordinate phosphorus compounds using several basis sets and density functional theory (DFT) functionals gave a modest fit to experimental chemical shifts, but an excellent linear fit when plotted against the experimental values....

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Autores principales: Hersh, William H, Chan, Tsz-Yeung
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Beilstein-Institut 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9843238/
https://www.ncbi.nlm.nih.gov/pubmed/36726479
http://dx.doi.org/10.3762/bjoc.19.4
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author Hersh, William H
Chan, Tsz-Yeung
author_facet Hersh, William H
Chan, Tsz-Yeung
author_sort Hersh, William H
collection PubMed
description Calculation of (31)P NMR chemical shifts for a series of tri- and tetracoordinate phosphorus compounds using several basis sets and density functional theory (DFT) functionals gave a modest fit to experimental chemical shifts, but an excellent linear fit when plotted against the experimental values. The resultant scaling methods were then applied to a variety of “large” compounds previously selected by Latypov et al. and a set of stereoisomeric and unusual compounds selected here. No one method was best for all structural types. For compounds that contain P–P bonds and P–C multiple bonds, the Latypov et al. method using the PBE0 functional was best (mean absolute deviation/root mean square deviation (MAD/RMSD) = 6.9/8.5 ppm and 6.6/8.2 ppm, respectively), but for the full set of compounds gave higher deviations (MAD/RMSD = 8.2/12.3 ppm), and failed by over 60 ppm for a three-membered phosphorus heterocycle. Use of the M06-2X functional for both the structural optimization and NMR chemical shift calculation was best overall for the compounds without P–C multiple bonds (MAD/RMSD = 5.4/7.1 ppm), but failed by 30–49 ppm for compounds having any P–C multiple-bond character. Failures of these magnitudes have not been reported previously for these widely used functionals. These failures were then used to screen a variety of recommended functionals, leading to better overall methods for calculation of these chemical shifts: optimization with the M06-2X functional and NMR calculation with the PBE0 or ωB97x-D functionals gave values for MAD/RMSD = 6.9/8.5 ppm and 6.8/9.1 ppm, respectively, over an experimental chemical shift range of −181 to 356 ppm. Due to the unexplained failures observed, we recommend use of more than one method when looking at novel structures.
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spelling pubmed-98432382023-01-31 Improving the accuracy of (31)P NMR chemical shift calculations by use of scaling methods Hersh, William H Chan, Tsz-Yeung Beilstein J Org Chem Full Research Paper Calculation of (31)P NMR chemical shifts for a series of tri- and tetracoordinate phosphorus compounds using several basis sets and density functional theory (DFT) functionals gave a modest fit to experimental chemical shifts, but an excellent linear fit when plotted against the experimental values. The resultant scaling methods were then applied to a variety of “large” compounds previously selected by Latypov et al. and a set of stereoisomeric and unusual compounds selected here. No one method was best for all structural types. For compounds that contain P–P bonds and P–C multiple bonds, the Latypov et al. method using the PBE0 functional was best (mean absolute deviation/root mean square deviation (MAD/RMSD) = 6.9/8.5 ppm and 6.6/8.2 ppm, respectively), but for the full set of compounds gave higher deviations (MAD/RMSD = 8.2/12.3 ppm), and failed by over 60 ppm for a three-membered phosphorus heterocycle. Use of the M06-2X functional for both the structural optimization and NMR chemical shift calculation was best overall for the compounds without P–C multiple bonds (MAD/RMSD = 5.4/7.1 ppm), but failed by 30–49 ppm for compounds having any P–C multiple-bond character. Failures of these magnitudes have not been reported previously for these widely used functionals. These failures were then used to screen a variety of recommended functionals, leading to better overall methods for calculation of these chemical shifts: optimization with the M06-2X functional and NMR calculation with the PBE0 or ωB97x-D functionals gave values for MAD/RMSD = 6.9/8.5 ppm and 6.8/9.1 ppm, respectively, over an experimental chemical shift range of −181 to 356 ppm. Due to the unexplained failures observed, we recommend use of more than one method when looking at novel structures. Beilstein-Institut 2023-01-10 /pmc/articles/PMC9843238/ /pubmed/36726479 http://dx.doi.org/10.3762/bjoc.19.4 Text en Copyright © 2023, Hersh and Chan https://creativecommons.org/licenses/by/4.0/This is an open access article licensed under the terms of the Beilstein-Institut Open Access License Agreement (https://www.beilstein-journals.org/bjoc/terms/terms), which is identical to the Creative Commons Attribution 4.0 International License (https://creativecommons.org/licenses/by/4.0 (https://creativecommons.org/licenses/by/4.0/) ). The reuse of material under this license requires that the author(s), source and license are credited. Third-party material in this article could be subject to other licenses (typically indicated in the credit line), and in this case, users are required to obtain permission from the license holder to reuse the material.
spellingShingle Full Research Paper
Hersh, William H
Chan, Tsz-Yeung
Improving the accuracy of (31)P NMR chemical shift calculations by use of scaling methods
title Improving the accuracy of (31)P NMR chemical shift calculations by use of scaling methods
title_full Improving the accuracy of (31)P NMR chemical shift calculations by use of scaling methods
title_fullStr Improving the accuracy of (31)P NMR chemical shift calculations by use of scaling methods
title_full_unstemmed Improving the accuracy of (31)P NMR chemical shift calculations by use of scaling methods
title_short Improving the accuracy of (31)P NMR chemical shift calculations by use of scaling methods
title_sort improving the accuracy of (31)p nmr chemical shift calculations by use of scaling methods
topic Full Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9843238/
https://www.ncbi.nlm.nih.gov/pubmed/36726479
http://dx.doi.org/10.3762/bjoc.19.4
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