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DeepSom: a CNN-based approach to somatic variant calling in WGS samples without a matched normal

MOTIVATION: Somatic mutations are usually called by analyzing the DNA sequence of a tumor sample in conjunction with a matched normal. However, a matched normal is not always available, for instance, in retrospective analysis or diagnostic settings. For such cases, tumor-only somatic variant calling...

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Detalles Bibliográficos
Autores principales: Vilov, Sergey, Heinig, Matthias
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9843587/
https://www.ncbi.nlm.nih.gov/pubmed/36637201
http://dx.doi.org/10.1093/bioinformatics/btac828