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High expression of PI4K2A predicted poor prognosis of colon adenocarcinoma (COAD) and correlated with immunity

BACKGROUND: PI4K2A has been found to have a tumor‐promoting role in various solid tumors and be involved in various biological procedures. In this article, we aim to investigate the prognostic values of PI4K2A and provide new insights in colon adenocarcinoma (COAD). METHODS: The Cancer Genome Atlas...

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Autores principales: Huang, Xinkun, Cao, Yang, Bao, Peng, Zhu, Bingye, Cheng, Zhouyang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9844633/
https://www.ncbi.nlm.nih.gov/pubmed/35634680
http://dx.doi.org/10.1002/cam4.4895
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author Huang, Xinkun
Cao, Yang
Bao, Peng
Zhu, Bingye
Cheng, Zhouyang
author_facet Huang, Xinkun
Cao, Yang
Bao, Peng
Zhu, Bingye
Cheng, Zhouyang
author_sort Huang, Xinkun
collection PubMed
description BACKGROUND: PI4K2A has been found to have a tumor‐promoting role in various solid tumors and be involved in various biological procedures. In this article, we aim to investigate the prognostic values of PI4K2A and provide new insights in colon adenocarcinoma (COAD). METHODS: The Cancer Genome Atlas (TCGA) database, Human Protein Atlas online database, and UALCAN database were used to analyze the expression of PI4K2A in COAD and the survival of patients. Univariate and multifactorial Cox regression analyses were used to assess the prognosis of PI4K2A on COAD. GSEA was used to explore PI4K2A‐related signaling pathways. In addition, the effect of PI4K2A on immune checkpoint inhibitors (ICIs) treatment was investigated by constructing a TIDE model and predicting the association between PI4K2A and anticancer drug sensitivity through the CellMiner database. RESULTS: In the TCGA database, PI4K2A was highly expressed in COAD and the similar results were verified by qRT‐PCR. Survival analysis, utilizing Kaplan–Meier curves, revealed that COAD patients with high PI4K2A expression had a worse prognosis. In addition, PI4K2A expression was discovered to have been associated with T‐stage, N‐stage, and pathological stage by logistic analysis. Next, we utilized univariate and multifactorial Cox regression analyses to identify PI4K2A as an independent predictor. Additionally, GSEA analysis indicates that PI4K2A is enriched in MAPK signaling pathway, Toll‐like receptor signaling pathway, etc. In COAD, PI4K2A was remarkably associated with the tumor immune microenvironment. In addition, by constructing a TIDE model, we discovered that COAD patients in the PI4K2A low‐expression cohort were better treated with ICI. Finally, analysis of the CellMiner database predicted that PI4K2A was adversely correlated with the sensitivity of various anticancer drugs. CONCLUSIONS: Our study suggests that PI4K2A may be a potential predictor of poor prognosis in COAD and a potential biomarker for early diagnosis, prognosis, and treatment.
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spelling pubmed-98446332023-01-24 High expression of PI4K2A predicted poor prognosis of colon adenocarcinoma (COAD) and correlated with immunity Huang, Xinkun Cao, Yang Bao, Peng Zhu, Bingye Cheng, Zhouyang Cancer Med Research Articles BACKGROUND: PI4K2A has been found to have a tumor‐promoting role in various solid tumors and be involved in various biological procedures. In this article, we aim to investigate the prognostic values of PI4K2A and provide new insights in colon adenocarcinoma (COAD). METHODS: The Cancer Genome Atlas (TCGA) database, Human Protein Atlas online database, and UALCAN database were used to analyze the expression of PI4K2A in COAD and the survival of patients. Univariate and multifactorial Cox regression analyses were used to assess the prognosis of PI4K2A on COAD. GSEA was used to explore PI4K2A‐related signaling pathways. In addition, the effect of PI4K2A on immune checkpoint inhibitors (ICIs) treatment was investigated by constructing a TIDE model and predicting the association between PI4K2A and anticancer drug sensitivity through the CellMiner database. RESULTS: In the TCGA database, PI4K2A was highly expressed in COAD and the similar results were verified by qRT‐PCR. Survival analysis, utilizing Kaplan–Meier curves, revealed that COAD patients with high PI4K2A expression had a worse prognosis. In addition, PI4K2A expression was discovered to have been associated with T‐stage, N‐stage, and pathological stage by logistic analysis. Next, we utilized univariate and multifactorial Cox regression analyses to identify PI4K2A as an independent predictor. Additionally, GSEA analysis indicates that PI4K2A is enriched in MAPK signaling pathway, Toll‐like receptor signaling pathway, etc. In COAD, PI4K2A was remarkably associated with the tumor immune microenvironment. In addition, by constructing a TIDE model, we discovered that COAD patients in the PI4K2A low‐expression cohort were better treated with ICI. Finally, analysis of the CellMiner database predicted that PI4K2A was adversely correlated with the sensitivity of various anticancer drugs. CONCLUSIONS: Our study suggests that PI4K2A may be a potential predictor of poor prognosis in COAD and a potential biomarker for early diagnosis, prognosis, and treatment. John Wiley and Sons Inc. 2022-05-30 /pmc/articles/PMC9844633/ /pubmed/35634680 http://dx.doi.org/10.1002/cam4.4895 Text en © 2022 The Authors. Cancer Medicine published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Huang, Xinkun
Cao, Yang
Bao, Peng
Zhu, Bingye
Cheng, Zhouyang
High expression of PI4K2A predicted poor prognosis of colon adenocarcinoma (COAD) and correlated with immunity
title High expression of PI4K2A predicted poor prognosis of colon adenocarcinoma (COAD) and correlated with immunity
title_full High expression of PI4K2A predicted poor prognosis of colon adenocarcinoma (COAD) and correlated with immunity
title_fullStr High expression of PI4K2A predicted poor prognosis of colon adenocarcinoma (COAD) and correlated with immunity
title_full_unstemmed High expression of PI4K2A predicted poor prognosis of colon adenocarcinoma (COAD) and correlated with immunity
title_short High expression of PI4K2A predicted poor prognosis of colon adenocarcinoma (COAD) and correlated with immunity
title_sort high expression of pi4k2a predicted poor prognosis of colon adenocarcinoma (coad) and correlated with immunity
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9844633/
https://www.ncbi.nlm.nih.gov/pubmed/35634680
http://dx.doi.org/10.1002/cam4.4895
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