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Construction of a prognostic glycolysis‐related lncRNA signature for patients with colorectal cancer

Aerobic glycolysis is a common metabolic phenotype in tumors that helps cancer cells adjust to severe living conditions and can aid metastasis in several types of carcinomas, including colorectal cancer (CRC). Long non‐coding RNAs (lncRNAs) can influence tumor biology and have been previously used t...

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Autores principales: Zhong, Xinyang, He, Xuefeng, Wang, Yaxian, Hu, Zijuan, Huang, Huixia, Zhao, Senlin, Zhang, Hong, Wei, Ping, Li, Dawei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9844662/
https://www.ncbi.nlm.nih.gov/pubmed/35616307
http://dx.doi.org/10.1002/cam4.4851
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author Zhong, Xinyang
He, Xuefeng
Wang, Yaxian
Hu, Zijuan
Huang, Huixia
Zhao, Senlin
Zhang, Hong
Wei, Ping
Li, Dawei
author_facet Zhong, Xinyang
He, Xuefeng
Wang, Yaxian
Hu, Zijuan
Huang, Huixia
Zhao, Senlin
Zhang, Hong
Wei, Ping
Li, Dawei
author_sort Zhong, Xinyang
collection PubMed
description Aerobic glycolysis is a common metabolic phenotype in tumors that helps cancer cells adjust to severe living conditions and can aid metastasis in several types of carcinomas, including colorectal cancer (CRC). Long non‐coding RNAs (lncRNAs) can influence tumor biology and have been previously used to assess patients' outcomes and to identify potential therapeutic targets. However, despite the importance of glycolysis‐related lncRNAs (GRLs) in the development of CRC, studies on their use as prognostic markers are still limited. Herein, we applied a series of bioinformatic analyses to screen potential prognostic lncRNAs for colorectal cancer. Out of all lncRNAs screened, nine GRLs were selected to constitute a prognostic signature. Based on the signature, two molecular subtypes were classified with distinct prognostic outcomes and excellent diagnostic accuracy (The 1‐, 3‐ and 5‐year AUC are 0.756, 0.716, and 0.721, respectively). The prognostic value of this signature was further validated using another cohort. The enriched molecular pathways, immune infiltration, and mutation landscape were also significantly different between the two groups. The different drug sensitivity results between the two groups suggest a potential strategy for precise treatment. Furthermore, we confirmed that AFAP1‐AS1 could regulate aerobic glycolysis and metastasis of CRC cells. Overall, we developed a glycolysis‐related lncRNA (GRL) signature and suggested that this signature could offer a predictive value and identify potential therapeutic targets for cancer therapy.
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spelling pubmed-98446622023-01-24 Construction of a prognostic glycolysis‐related lncRNA signature for patients with colorectal cancer Zhong, Xinyang He, Xuefeng Wang, Yaxian Hu, Zijuan Huang, Huixia Zhao, Senlin Zhang, Hong Wei, Ping Li, Dawei Cancer Med Research Articles Aerobic glycolysis is a common metabolic phenotype in tumors that helps cancer cells adjust to severe living conditions and can aid metastasis in several types of carcinomas, including colorectal cancer (CRC). Long non‐coding RNAs (lncRNAs) can influence tumor biology and have been previously used to assess patients' outcomes and to identify potential therapeutic targets. However, despite the importance of glycolysis‐related lncRNAs (GRLs) in the development of CRC, studies on their use as prognostic markers are still limited. Herein, we applied a series of bioinformatic analyses to screen potential prognostic lncRNAs for colorectal cancer. Out of all lncRNAs screened, nine GRLs were selected to constitute a prognostic signature. Based on the signature, two molecular subtypes were classified with distinct prognostic outcomes and excellent diagnostic accuracy (The 1‐, 3‐ and 5‐year AUC are 0.756, 0.716, and 0.721, respectively). The prognostic value of this signature was further validated using another cohort. The enriched molecular pathways, immune infiltration, and mutation landscape were also significantly different between the two groups. The different drug sensitivity results between the two groups suggest a potential strategy for precise treatment. Furthermore, we confirmed that AFAP1‐AS1 could regulate aerobic glycolysis and metastasis of CRC cells. Overall, we developed a glycolysis‐related lncRNA (GRL) signature and suggested that this signature could offer a predictive value and identify potential therapeutic targets for cancer therapy. John Wiley and Sons Inc. 2022-05-26 /pmc/articles/PMC9844662/ /pubmed/35616307 http://dx.doi.org/10.1002/cam4.4851 Text en © 2022 The Authors. Cancer Medicine published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Zhong, Xinyang
He, Xuefeng
Wang, Yaxian
Hu, Zijuan
Huang, Huixia
Zhao, Senlin
Zhang, Hong
Wei, Ping
Li, Dawei
Construction of a prognostic glycolysis‐related lncRNA signature for patients with colorectal cancer
title Construction of a prognostic glycolysis‐related lncRNA signature for patients with colorectal cancer
title_full Construction of a prognostic glycolysis‐related lncRNA signature for patients with colorectal cancer
title_fullStr Construction of a prognostic glycolysis‐related lncRNA signature for patients with colorectal cancer
title_full_unstemmed Construction of a prognostic glycolysis‐related lncRNA signature for patients with colorectal cancer
title_short Construction of a prognostic glycolysis‐related lncRNA signature for patients with colorectal cancer
title_sort construction of a prognostic glycolysis‐related lncrna signature for patients with colorectal cancer
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9844662/
https://www.ncbi.nlm.nih.gov/pubmed/35616307
http://dx.doi.org/10.1002/cam4.4851
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