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GWAS of depression in 4,520 individuals from the Russian population highlights the role of MAGI2 (S-SCAM) in the gut-brain axis

We present the results of the depression Genome-wide association studies study performed on a cohort of Russian-descent individuals, which identified a novel association at chromosome 7q21 locus. Gene prioritization analysis based on already known depression risk genes indicated MAGI2 (S-SCAM) as th...

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Autores principales: Pinakhina, Daria, Yermakovich, Danat, Vergasova, Ekaterina, Kasyanov, Evgeny, Rukavishnikov, Grigory, Rezapova, Valeriia, Kolosov, Nikita, Sergushichev, Alexey, Popov, Iaroslav, Kovalenko, Elena, Ilinskaya, Anna, Kim, Anna, Plotnikov, Nikolay, Ilinsky, Valery, Neznanov, Nikholay, Mazo, Galina, Kibitov, Alexander, Rakitko, Alexander, Artomov, Mykyta
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9845291/
https://www.ncbi.nlm.nih.gov/pubmed/36685848
http://dx.doi.org/10.3389/fgene.2022.972196
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author Pinakhina, Daria
Yermakovich, Danat
Vergasova, Ekaterina
Kasyanov, Evgeny
Rukavishnikov, Grigory
Rezapova, Valeriia
Kolosov, Nikita
Sergushichev, Alexey
Popov, Iaroslav
Kovalenko, Elena
Ilinskaya, Anna
Kim, Anna
Plotnikov, Nikolay
Ilinsky, Valery
Neznanov, Nikholay
Mazo, Galina
Kibitov, Alexander
Rakitko, Alexander
Artomov, Mykyta
author_facet Pinakhina, Daria
Yermakovich, Danat
Vergasova, Ekaterina
Kasyanov, Evgeny
Rukavishnikov, Grigory
Rezapova, Valeriia
Kolosov, Nikita
Sergushichev, Alexey
Popov, Iaroslav
Kovalenko, Elena
Ilinskaya, Anna
Kim, Anna
Plotnikov, Nikolay
Ilinsky, Valery
Neznanov, Nikholay
Mazo, Galina
Kibitov, Alexander
Rakitko, Alexander
Artomov, Mykyta
author_sort Pinakhina, Daria
collection PubMed
description We present the results of the depression Genome-wide association studies study performed on a cohort of Russian-descent individuals, which identified a novel association at chromosome 7q21 locus. Gene prioritization analysis based on already known depression risk genes indicated MAGI2 (S-SCAM) as the most probable gene from the locus and potential susceptibility gene for the disease. Brain and gut expression patterns were the main features highlighting functional relatedness of MAGI2 to the previously known depression risk genes. Local genetic covariance analysis, analysis of gene expression, provided initial suggestive evidence of hospital anxiety and depression scale and diagnostic and statistical manual of mental disorders scales having a different relationship with gut-brain axis disturbance. It should be noted, that while several independent methods successfully in silico validate the role of MAGI2, we were unable to replicate genetic association for the leading variant in the MAGI2 locus, therefore the role of rs521851 in depression should be interpreted with caution.
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spelling pubmed-98452912023-01-19 GWAS of depression in 4,520 individuals from the Russian population highlights the role of MAGI2 (S-SCAM) in the gut-brain axis Pinakhina, Daria Yermakovich, Danat Vergasova, Ekaterina Kasyanov, Evgeny Rukavishnikov, Grigory Rezapova, Valeriia Kolosov, Nikita Sergushichev, Alexey Popov, Iaroslav Kovalenko, Elena Ilinskaya, Anna Kim, Anna Plotnikov, Nikolay Ilinsky, Valery Neznanov, Nikholay Mazo, Galina Kibitov, Alexander Rakitko, Alexander Artomov, Mykyta Front Genet Genetics We present the results of the depression Genome-wide association studies study performed on a cohort of Russian-descent individuals, which identified a novel association at chromosome 7q21 locus. Gene prioritization analysis based on already known depression risk genes indicated MAGI2 (S-SCAM) as the most probable gene from the locus and potential susceptibility gene for the disease. Brain and gut expression patterns were the main features highlighting functional relatedness of MAGI2 to the previously known depression risk genes. Local genetic covariance analysis, analysis of gene expression, provided initial suggestive evidence of hospital anxiety and depression scale and diagnostic and statistical manual of mental disorders scales having a different relationship with gut-brain axis disturbance. It should be noted, that while several independent methods successfully in silico validate the role of MAGI2, we were unable to replicate genetic association for the leading variant in the MAGI2 locus, therefore the role of rs521851 in depression should be interpreted with caution. Frontiers Media S.A. 2023-01-04 /pmc/articles/PMC9845291/ /pubmed/36685848 http://dx.doi.org/10.3389/fgene.2022.972196 Text en Copyright © 2023 Pinakhina, Yermakovich, Vergasova, Kasyanov, Rukavishnikov, Rezapova, Kolosov, Sergushichev, Popov, Kovalenko, Ilinskaya, Kim, Plotnikov, Ilinsky, Neznanov, Mazo, Kibitov, Rakitko and Artomov. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Pinakhina, Daria
Yermakovich, Danat
Vergasova, Ekaterina
Kasyanov, Evgeny
Rukavishnikov, Grigory
Rezapova, Valeriia
Kolosov, Nikita
Sergushichev, Alexey
Popov, Iaroslav
Kovalenko, Elena
Ilinskaya, Anna
Kim, Anna
Plotnikov, Nikolay
Ilinsky, Valery
Neznanov, Nikholay
Mazo, Galina
Kibitov, Alexander
Rakitko, Alexander
Artomov, Mykyta
GWAS of depression in 4,520 individuals from the Russian population highlights the role of MAGI2 (S-SCAM) in the gut-brain axis
title GWAS of depression in 4,520 individuals from the Russian population highlights the role of MAGI2 (S-SCAM) in the gut-brain axis
title_full GWAS of depression in 4,520 individuals from the Russian population highlights the role of MAGI2 (S-SCAM) in the gut-brain axis
title_fullStr GWAS of depression in 4,520 individuals from the Russian population highlights the role of MAGI2 (S-SCAM) in the gut-brain axis
title_full_unstemmed GWAS of depression in 4,520 individuals from the Russian population highlights the role of MAGI2 (S-SCAM) in the gut-brain axis
title_short GWAS of depression in 4,520 individuals from the Russian population highlights the role of MAGI2 (S-SCAM) in the gut-brain axis
title_sort gwas of depression in 4,520 individuals from the russian population highlights the role of magi2 (s-scam) in the gut-brain axis
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9845291/
https://www.ncbi.nlm.nih.gov/pubmed/36685848
http://dx.doi.org/10.3389/fgene.2022.972196
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