Cargando…
GWAS of depression in 4,520 individuals from the Russian population highlights the role of MAGI2 (S-SCAM) in the gut-brain axis
We present the results of the depression Genome-wide association studies study performed on a cohort of Russian-descent individuals, which identified a novel association at chromosome 7q21 locus. Gene prioritization analysis based on already known depression risk genes indicated MAGI2 (S-SCAM) as th...
Autores principales: | , , , , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9845291/ https://www.ncbi.nlm.nih.gov/pubmed/36685848 http://dx.doi.org/10.3389/fgene.2022.972196 |
_version_ | 1784870868200980480 |
---|---|
author | Pinakhina, Daria Yermakovich, Danat Vergasova, Ekaterina Kasyanov, Evgeny Rukavishnikov, Grigory Rezapova, Valeriia Kolosov, Nikita Sergushichev, Alexey Popov, Iaroslav Kovalenko, Elena Ilinskaya, Anna Kim, Anna Plotnikov, Nikolay Ilinsky, Valery Neznanov, Nikholay Mazo, Galina Kibitov, Alexander Rakitko, Alexander Artomov, Mykyta |
author_facet | Pinakhina, Daria Yermakovich, Danat Vergasova, Ekaterina Kasyanov, Evgeny Rukavishnikov, Grigory Rezapova, Valeriia Kolosov, Nikita Sergushichev, Alexey Popov, Iaroslav Kovalenko, Elena Ilinskaya, Anna Kim, Anna Plotnikov, Nikolay Ilinsky, Valery Neznanov, Nikholay Mazo, Galina Kibitov, Alexander Rakitko, Alexander Artomov, Mykyta |
author_sort | Pinakhina, Daria |
collection | PubMed |
description | We present the results of the depression Genome-wide association studies study performed on a cohort of Russian-descent individuals, which identified a novel association at chromosome 7q21 locus. Gene prioritization analysis based on already known depression risk genes indicated MAGI2 (S-SCAM) as the most probable gene from the locus and potential susceptibility gene for the disease. Brain and gut expression patterns were the main features highlighting functional relatedness of MAGI2 to the previously known depression risk genes. Local genetic covariance analysis, analysis of gene expression, provided initial suggestive evidence of hospital anxiety and depression scale and diagnostic and statistical manual of mental disorders scales having a different relationship with gut-brain axis disturbance. It should be noted, that while several independent methods successfully in silico validate the role of MAGI2, we were unable to replicate genetic association for the leading variant in the MAGI2 locus, therefore the role of rs521851 in depression should be interpreted with caution. |
format | Online Article Text |
id | pubmed-9845291 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-98452912023-01-19 GWAS of depression in 4,520 individuals from the Russian population highlights the role of MAGI2 (S-SCAM) in the gut-brain axis Pinakhina, Daria Yermakovich, Danat Vergasova, Ekaterina Kasyanov, Evgeny Rukavishnikov, Grigory Rezapova, Valeriia Kolosov, Nikita Sergushichev, Alexey Popov, Iaroslav Kovalenko, Elena Ilinskaya, Anna Kim, Anna Plotnikov, Nikolay Ilinsky, Valery Neznanov, Nikholay Mazo, Galina Kibitov, Alexander Rakitko, Alexander Artomov, Mykyta Front Genet Genetics We present the results of the depression Genome-wide association studies study performed on a cohort of Russian-descent individuals, which identified a novel association at chromosome 7q21 locus. Gene prioritization analysis based on already known depression risk genes indicated MAGI2 (S-SCAM) as the most probable gene from the locus and potential susceptibility gene for the disease. Brain and gut expression patterns were the main features highlighting functional relatedness of MAGI2 to the previously known depression risk genes. Local genetic covariance analysis, analysis of gene expression, provided initial suggestive evidence of hospital anxiety and depression scale and diagnostic and statistical manual of mental disorders scales having a different relationship with gut-brain axis disturbance. It should be noted, that while several independent methods successfully in silico validate the role of MAGI2, we were unable to replicate genetic association for the leading variant in the MAGI2 locus, therefore the role of rs521851 in depression should be interpreted with caution. Frontiers Media S.A. 2023-01-04 /pmc/articles/PMC9845291/ /pubmed/36685848 http://dx.doi.org/10.3389/fgene.2022.972196 Text en Copyright © 2023 Pinakhina, Yermakovich, Vergasova, Kasyanov, Rukavishnikov, Rezapova, Kolosov, Sergushichev, Popov, Kovalenko, Ilinskaya, Kim, Plotnikov, Ilinsky, Neznanov, Mazo, Kibitov, Rakitko and Artomov. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics Pinakhina, Daria Yermakovich, Danat Vergasova, Ekaterina Kasyanov, Evgeny Rukavishnikov, Grigory Rezapova, Valeriia Kolosov, Nikita Sergushichev, Alexey Popov, Iaroslav Kovalenko, Elena Ilinskaya, Anna Kim, Anna Plotnikov, Nikolay Ilinsky, Valery Neznanov, Nikholay Mazo, Galina Kibitov, Alexander Rakitko, Alexander Artomov, Mykyta GWAS of depression in 4,520 individuals from the Russian population highlights the role of MAGI2 (S-SCAM) in the gut-brain axis |
title | GWAS of depression in 4,520 individuals from the Russian population highlights the role of MAGI2 (S-SCAM) in the gut-brain axis |
title_full | GWAS of depression in 4,520 individuals from the Russian population highlights the role of MAGI2 (S-SCAM) in the gut-brain axis |
title_fullStr | GWAS of depression in 4,520 individuals from the Russian population highlights the role of MAGI2 (S-SCAM) in the gut-brain axis |
title_full_unstemmed | GWAS of depression in 4,520 individuals from the Russian population highlights the role of MAGI2 (S-SCAM) in the gut-brain axis |
title_short | GWAS of depression in 4,520 individuals from the Russian population highlights the role of MAGI2 (S-SCAM) in the gut-brain axis |
title_sort | gwas of depression in 4,520 individuals from the russian population highlights the role of magi2 (s-scam) in the gut-brain axis |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9845291/ https://www.ncbi.nlm.nih.gov/pubmed/36685848 http://dx.doi.org/10.3389/fgene.2022.972196 |
work_keys_str_mv | AT pinakhinadaria gwasofdepressionin4520individualsfromtherussianpopulationhighlightstheroleofmagi2sscaminthegutbrainaxis AT yermakovichdanat gwasofdepressionin4520individualsfromtherussianpopulationhighlightstheroleofmagi2sscaminthegutbrainaxis AT vergasovaekaterina gwasofdepressionin4520individualsfromtherussianpopulationhighlightstheroleofmagi2sscaminthegutbrainaxis AT kasyanovevgeny gwasofdepressionin4520individualsfromtherussianpopulationhighlightstheroleofmagi2sscaminthegutbrainaxis AT rukavishnikovgrigory gwasofdepressionin4520individualsfromtherussianpopulationhighlightstheroleofmagi2sscaminthegutbrainaxis AT rezapovavaleriia gwasofdepressionin4520individualsfromtherussianpopulationhighlightstheroleofmagi2sscaminthegutbrainaxis AT kolosovnikita gwasofdepressionin4520individualsfromtherussianpopulationhighlightstheroleofmagi2sscaminthegutbrainaxis AT sergushichevalexey gwasofdepressionin4520individualsfromtherussianpopulationhighlightstheroleofmagi2sscaminthegutbrainaxis AT popoviaroslav gwasofdepressionin4520individualsfromtherussianpopulationhighlightstheroleofmagi2sscaminthegutbrainaxis AT kovalenkoelena gwasofdepressionin4520individualsfromtherussianpopulationhighlightstheroleofmagi2sscaminthegutbrainaxis AT ilinskayaanna gwasofdepressionin4520individualsfromtherussianpopulationhighlightstheroleofmagi2sscaminthegutbrainaxis AT kimanna gwasofdepressionin4520individualsfromtherussianpopulationhighlightstheroleofmagi2sscaminthegutbrainaxis AT plotnikovnikolay gwasofdepressionin4520individualsfromtherussianpopulationhighlightstheroleofmagi2sscaminthegutbrainaxis AT ilinskyvalery gwasofdepressionin4520individualsfromtherussianpopulationhighlightstheroleofmagi2sscaminthegutbrainaxis AT neznanovnikholay gwasofdepressionin4520individualsfromtherussianpopulationhighlightstheroleofmagi2sscaminthegutbrainaxis AT mazogalina gwasofdepressionin4520individualsfromtherussianpopulationhighlightstheroleofmagi2sscaminthegutbrainaxis AT kibitovalexander gwasofdepressionin4520individualsfromtherussianpopulationhighlightstheroleofmagi2sscaminthegutbrainaxis AT rakitkoalexander gwasofdepressionin4520individualsfromtherussianpopulationhighlightstheroleofmagi2sscaminthegutbrainaxis AT artomovmykyta gwasofdepressionin4520individualsfromtherussianpopulationhighlightstheroleofmagi2sscaminthegutbrainaxis |