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A pan-cancer analysis reveals role of clusterin (CLU) in carcinogenesis and prognosis of human tumors
Clusterin (CLU) is a chaperone-like protein that has been demonstrated to have a direct relationship with cancer occurrence, progression, or metastasis. Clusterin was downregulated in tumor tissues using three datasets of tongue squamous carcinoma from the Gene Expression Omnibus. We further retriev...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9846084/ https://www.ncbi.nlm.nih.gov/pubmed/36685863 http://dx.doi.org/10.3389/fgene.2022.1056184 |
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author | Fu, Yizhe Du, Qiao Cui, Tiehan Lu, Yuying Niu, Guangliang |
author_facet | Fu, Yizhe Du, Qiao Cui, Tiehan Lu, Yuying Niu, Guangliang |
author_sort | Fu, Yizhe |
collection | PubMed |
description | Clusterin (CLU) is a chaperone-like protein that has been demonstrated to have a direct relationship with cancer occurrence, progression, or metastasis. Clusterin was downregulated in tumor tissues using three datasets of tongue squamous carcinoma from the Gene Expression Omnibus. We further retrieved datasets from The Cancer Genome Atlas and Gene Expression Omnibus to thoroughly investigate the carcinogenic consequences of Clusterin. Our findings revealed that decreased Clusterin expression in malignancies was associated with a worse overall survival prognosis in individuals with multiple tumors; Clusterin gene deep deletions were found in almost all malignancies and were connected to most cancer patient’s prognosis, Clusterin DNA methylation level was dependent on tumor type, Clusterin expression was also linked to the invasion of cancer-associated CD8+ T-cells and fibroblasts in numerous cancer forms. Moreover, pathway enrichment analysis revealed that Clusterin primarily regulates biological processes such as cholesterol metabolism, phospholipid binding, and protein-lipid complex formation. Overall, our pan-cancer research suggests that Clusterin expression levels are linked to tumor carcinogenesis and prognosis, which contributes to understanding the probable mechanism of Clusterin in tumorigenesis as well as its clinical prognostic significance. |
format | Online Article Text |
id | pubmed-9846084 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-98460842023-01-19 A pan-cancer analysis reveals role of clusterin (CLU) in carcinogenesis and prognosis of human tumors Fu, Yizhe Du, Qiao Cui, Tiehan Lu, Yuying Niu, Guangliang Front Genet Genetics Clusterin (CLU) is a chaperone-like protein that has been demonstrated to have a direct relationship with cancer occurrence, progression, or metastasis. Clusterin was downregulated in tumor tissues using three datasets of tongue squamous carcinoma from the Gene Expression Omnibus. We further retrieved datasets from The Cancer Genome Atlas and Gene Expression Omnibus to thoroughly investigate the carcinogenic consequences of Clusterin. Our findings revealed that decreased Clusterin expression in malignancies was associated with a worse overall survival prognosis in individuals with multiple tumors; Clusterin gene deep deletions were found in almost all malignancies and were connected to most cancer patient’s prognosis, Clusterin DNA methylation level was dependent on tumor type, Clusterin expression was also linked to the invasion of cancer-associated CD8+ T-cells and fibroblasts in numerous cancer forms. Moreover, pathway enrichment analysis revealed that Clusterin primarily regulates biological processes such as cholesterol metabolism, phospholipid binding, and protein-lipid complex formation. Overall, our pan-cancer research suggests that Clusterin expression levels are linked to tumor carcinogenesis and prognosis, which contributes to understanding the probable mechanism of Clusterin in tumorigenesis as well as its clinical prognostic significance. Frontiers Media S.A. 2023-01-04 /pmc/articles/PMC9846084/ /pubmed/36685863 http://dx.doi.org/10.3389/fgene.2022.1056184 Text en Copyright © 2023 Fu, Du, Cui, Lu and Niu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics Fu, Yizhe Du, Qiao Cui, Tiehan Lu, Yuying Niu, Guangliang A pan-cancer analysis reveals role of clusterin (CLU) in carcinogenesis and prognosis of human tumors |
title | A pan-cancer analysis reveals role of clusterin (CLU) in carcinogenesis and prognosis of human tumors |
title_full | A pan-cancer analysis reveals role of clusterin (CLU) in carcinogenesis and prognosis of human tumors |
title_fullStr | A pan-cancer analysis reveals role of clusterin (CLU) in carcinogenesis and prognosis of human tumors |
title_full_unstemmed | A pan-cancer analysis reveals role of clusterin (CLU) in carcinogenesis and prognosis of human tumors |
title_short | A pan-cancer analysis reveals role of clusterin (CLU) in carcinogenesis and prognosis of human tumors |
title_sort | pan-cancer analysis reveals role of clusterin (clu) in carcinogenesis and prognosis of human tumors |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9846084/ https://www.ncbi.nlm.nih.gov/pubmed/36685863 http://dx.doi.org/10.3389/fgene.2022.1056184 |
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