The complete chloroplast genome of Prunus phaeosticta (Hance) Maxim. (Rosaceae) and its phylogenetic implications

The complete chloroplast (cp) genome of Prunus phaeosticta (Hance) Maxim. has been characterized by reference-based assembly using Illumina paired-end data. The circular complete cp genome is 158,752 bp in length, comprising a large single-copy (LSC) region of 87,085 bp, a small single-copy (SSC) re...

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Autores principales: Wu, Jia-Qi, Wang, Yi, Sun, Ping, Sun, Zhong-Shuai, Shen, Jian-Sheng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2023
Materias:
Plastome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9848267/
https://www.ncbi.nlm.nih.gov/pubmed/36685644
http://dx.doi.org/10.1080/23802359.2022.2163841
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author Wu, Jia-Qi
Wang, Yi
Sun, Ping
Sun, Zhong-Shuai
Shen, Jian-Sheng
author_facet Wu, Jia-Qi
Wang, Yi
Sun, Ping
Sun, Zhong-Shuai
Shen, Jian-Sheng
author_sort Wu, Jia-Qi
collection PubMed
description The complete chloroplast (cp) genome of Prunus phaeosticta (Hance) Maxim. has been characterized by reference-based assembly using Illumina paired-end data. The circular complete cp genome is 158,752 bp in length, comprising a large single-copy (LSC) region of 87,085 bp, a small single-copy (SSC) region of 18,923 bp, and a pair of inverted repeats (IRs) of 26,372 bp.A total of 129 functional genes were identified, including 84 protein-coding genes, 37 tRNA genes, and 8 ribosomal RNA genes. The phylogenetic analysis showed that P. phaeosticta displayed a kinship to Prunus zippeliana.
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spelling pubmed-98482672023-01-19 The complete chloroplast genome of Prunus phaeosticta (Hance) Maxim. (Rosaceae) and its phylogenetic implications Wu, Jia-Qi Wang, Yi Sun, Ping Sun, Zhong-Shuai Shen, Jian-Sheng Mitochondrial DNA B Resour Plastome Announcement The complete chloroplast (cp) genome of Prunus phaeosticta (Hance) Maxim. has been characterized by reference-based assembly using Illumina paired-end data. The circular complete cp genome is 158,752 bp in length, comprising a large single-copy (LSC) region of 87,085 bp, a small single-copy (SSC) region of 18,923 bp, and a pair of inverted repeats (IRs) of 26,372 bp.A total of 129 functional genes were identified, including 84 protein-coding genes, 37 tRNA genes, and 8 ribosomal RNA genes. The phylogenetic analysis showed that P. phaeosticta displayed a kinship to Prunus zippeliana. Taylor & Francis 2023-01-15 /pmc/articles/PMC9848267/ /pubmed/36685644 http://dx.doi.org/10.1080/23802359.2022.2163841 Text en © 2023 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Plastome Announcement
Wu, Jia-Qi
Wang, Yi
Sun, Ping
Sun, Zhong-Shuai
Shen, Jian-Sheng
The complete chloroplast genome of Prunus phaeosticta (Hance) Maxim. (Rosaceae) and its phylogenetic implications
title The complete chloroplast genome of Prunus phaeosticta (Hance) Maxim. (Rosaceae) and its phylogenetic implications
title_full The complete chloroplast genome of Prunus phaeosticta (Hance) Maxim. (Rosaceae) and its phylogenetic implications
title_fullStr The complete chloroplast genome of Prunus phaeosticta (Hance) Maxim. (Rosaceae) and its phylogenetic implications
title_full_unstemmed The complete chloroplast genome of Prunus phaeosticta (Hance) Maxim. (Rosaceae) and its phylogenetic implications
title_short The complete chloroplast genome of Prunus phaeosticta (Hance) Maxim. (Rosaceae) and its phylogenetic implications
title_sort complete chloroplast genome of prunus phaeosticta (hance) maxim. (rosaceae) and its phylogenetic implications
topic Plastome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9848267/
https://www.ncbi.nlm.nih.gov/pubmed/36685644
http://dx.doi.org/10.1080/23802359.2022.2163841
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