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Complete chloroplast genome of the oil-bearing shrub Staphylea bumalda DC (Staphyleaceae)
Staphylea bumalda DC, belonging to family Staphyleaceae, is a woody understory tree that is both edible and medicinal and produces oil with high economic value. This study reports the first complete chloroplast genome sequence of S. bumalda. The complete chloroplast genome sequence of S. bumalda is...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9848370/ https://www.ncbi.nlm.nih.gov/pubmed/36685652 http://dx.doi.org/10.1080/23802359.2022.2164701 |
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author | Zhao, Han Qin, Yue Zhu, Gaopu Han, Tao Liu, Panfeng |
author_facet | Zhao, Han Qin, Yue Zhu, Gaopu Han, Tao Liu, Panfeng |
author_sort | Zhao, Han |
collection | PubMed |
description | Staphylea bumalda DC, belonging to family Staphyleaceae, is a woody understory tree that is both edible and medicinal and produces oil with high economic value. This study reports the first complete chloroplast genome sequence of S. bumalda. The complete chloroplast genome sequence of S. bumalda is 160,319 bp in length with an overall GC content of 32.79%, which is composed of a large single-copy region (LSC: 89,401 bp), a small single-copy region (SSC: 18,834 bp), and two inverted repeat regions (IR: 26,042 bp). A total of 130 genes were predicted in this genome, including 85 protein-coding genes, 37 tRNA genes, and eight rRNA genes. The phylogenetic analysis based on 14 complete chloroplast sequences from related species revealed that S. bumalda is a sister to S. holocarpa. |
format | Online Article Text |
id | pubmed-9848370 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-98483702023-01-19 Complete chloroplast genome of the oil-bearing shrub Staphylea bumalda DC (Staphyleaceae) Zhao, Han Qin, Yue Zhu, Gaopu Han, Tao Liu, Panfeng Mitochondrial DNA B Resour Plastome Announcement Staphylea bumalda DC, belonging to family Staphyleaceae, is a woody understory tree that is both edible and medicinal and produces oil with high economic value. This study reports the first complete chloroplast genome sequence of S. bumalda. The complete chloroplast genome sequence of S. bumalda is 160,319 bp in length with an overall GC content of 32.79%, which is composed of a large single-copy region (LSC: 89,401 bp), a small single-copy region (SSC: 18,834 bp), and two inverted repeat regions (IR: 26,042 bp). A total of 130 genes were predicted in this genome, including 85 protein-coding genes, 37 tRNA genes, and eight rRNA genes. The phylogenetic analysis based on 14 complete chloroplast sequences from related species revealed that S. bumalda is a sister to S. holocarpa. Taylor & Francis 2023-01-13 /pmc/articles/PMC9848370/ /pubmed/36685652 http://dx.doi.org/10.1080/23802359.2022.2164701 Text en © 2023 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Plastome Announcement Zhao, Han Qin, Yue Zhu, Gaopu Han, Tao Liu, Panfeng Complete chloroplast genome of the oil-bearing shrub Staphylea bumalda DC (Staphyleaceae) |
title | Complete chloroplast genome of the oil-bearing shrub Staphylea bumalda DC (Staphyleaceae) |
title_full | Complete chloroplast genome of the oil-bearing shrub Staphylea bumalda DC (Staphyleaceae) |
title_fullStr | Complete chloroplast genome of the oil-bearing shrub Staphylea bumalda DC (Staphyleaceae) |
title_full_unstemmed | Complete chloroplast genome of the oil-bearing shrub Staphylea bumalda DC (Staphyleaceae) |
title_short | Complete chloroplast genome of the oil-bearing shrub Staphylea bumalda DC (Staphyleaceae) |
title_sort | complete chloroplast genome of the oil-bearing shrub staphylea bumalda dc (staphyleaceae) |
topic | Plastome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9848370/ https://www.ncbi.nlm.nih.gov/pubmed/36685652 http://dx.doi.org/10.1080/23802359.2022.2164701 |
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